LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g0777	ATGATCATTCAAACACTTCATTCCAGCCCAACCTTCCATGGCTTTTCTAGCTTCCACTCACACCTTTCTTGCTCTTCATCATCATCCTCACCATTCCTTGCTAAACGCTTTCTCTCCTTCGTTCCATTCCCTTCAAGAAATCCCCTTCTCAAGTTCAATTCCACTTCAAACGACAGCACTCCGGACCAAGGTTCGGATTCAGCCTTATGCATGCAGCAATCCGGTCCTTCATCTGTTAGATTGGGAGATACGGATTATCTCCTTGATGCTCCAGAATCTGTTGGAGATGGCTTCTCTTTTAGTGGAGGAAAATATTCAGATGAGCCAAGTCCAAGTGATGAGTGGTTTAAACAAGGGAAAATGGTTAAAGCCTATTCAAGTTCTGGCAGTGGCGAAAAGGCAAAAGATCCAATTTTCGGGCTCACTATGGGTGCTGGTTCTCAAGCTAGTAGCGATTTTTTCAGATGGTTTTGTGTTGAAGTTGGAAGTGCAGATAATCCATCAGTGATACTAATCCATGGTTTCCCTTCACAGGCATATTCATATCGCAAAGTTCTTCCAGTTCTCTCCAAGGACTATCATGCCATAGCTTTTGACTGGTTAGGATTTGGGTTCTCTGATAAGCCTCAACCAAGATATGGATTTGACTACACACTGGATGAATATGTGTCATCATTGGAATCGCTTATCGATGAACTTGCTGTTACTAAAGTCTCACTTGTTGTTCAAGGATATTTTGCACCAGTTGTAGTTAAGTATGCCAACTCTAATCAGGAAAAGATCAAGAACTTAATACTCCTTAATCCACCTCTAACAGCCCAACATGCCAAGCTTCCTCCAACATTATCCATTTTCAGCAACTTTCTGCTAGGTGAAATATTTTCACAGGATCCATTAAGAGCCAGTGACAAAGCTCTAACAAGCTGTGGCCCCTATAAAATGAAAGAAGAAGATGCAATGGTTTATAGAAGACCCTATCTCACATCTGGCTCCTCAGGTTTTGCACTAAATGCACTTAGCAGGACCATGAAGAAAGACCTCAAGCGGTATGTGGAGGATATGCAGAGAATACTCAAAGACCAAAGTTGGAAAGTGAAAACAACAATATGCTGGGGACAAAGGGACCGTTGGTTTCGTTATGATGGAGTGGAAAATTTCTGTAAGGATTCCAATCATACACTTATTGAAGTTCCAAAGGCAGGACATCATGTGCAAGAAGATTGTGGTGAAGAACTTGGACAACTTATTTATAAGACAATAAGAAGAAGGGACTACATATGA	1281	0.4145	MIIQTLHSSPTFHGFSSFHSHLSCSSSSSSPFLAKRFLSFVPFPSRNPLLKFNSTSNDSTPDQGSDSALCMQQSGPSSVRLGDTDYLLDAPESVGDGFSFSGGKYSDEPSPSDEWFKQGKMVKAYSSSGSGEKAKDPIFGLTMGAGSQASSDFFRWFCVEVGSADNPSVILIHGFPSQAYSYRKVLPVLSKDYHAIAFDWLGFGFSDKPQPRYGFDYTLDEYVSSLESLIDELAVTKVSLVVQGYFAPVVVKYANSNQEKIKNLILLNPPLTAQHAKLPPTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLTSGSSGFALNALSRTMKKDLKRYVEDMQRILKDQSWKVKTTICWGQRDRWFRYDGVENFCKDSNHTLIEVPKAGHHVQEDCGEELGQLIYKTIRRRDYI*	427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g0777	426	PANTHER	EPOXIDE HYDROLASE	77	422	-	-
	Ahy19g0777	426	SUPERFAMILY	alpha/beta-Hydrolases	152	422	IPR029058	-
	Ahy19g0777	426	PANTHER	HYDROLASE-LIKE	77	422	-	-
	Ahy19g0777	426	PRINTS	Alpha/beta hydrolase fold signature	192	207	IPR000073	-
	Ahy19g0777	426	PRINTS	Alpha/beta hydrolase fold signature	367	381	IPR000073	-
	Ahy19g0777	426	PRINTS	Alpha/beta hydrolase fold signature	254	267	IPR000073	-
	Ahy19g0777	426	Gene3D	alpha/beta hydrolase	146	418	IPR029058	-
	Ahy19g0777	426	MobiDBLite	consensus disorder prediction	52	77	-	-
	Ahy19g0777	426	Pfam	alpha/beta hydrolase fold	167	406	IPR000073	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g0777	Ahy-Chr19	11181269	11232883	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy19g0777	160	298	Acyl Lipid Metabolism Gene Families	AT3G05600	30.769	5.41e-09	54.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g0777	-		-	gmx:100809126	632.484

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy19g0777	19	11181269	11232883	Ahy2g0119	2	1312855	1318912	hybridization