Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0775 ATGGACCAGAAAGAATCAGTTAGGGACATAACTCCTTGGGATGGGACTCTTTCTTCAAGTGACTTTTTTAGTGCTGCTTGTGCCTTTTCTGAGAAGTGGAAAAGGTTCAATGCTTTTGTTCCTCCATGGCTGTGGGTACCATCTCGAAAGCATCATTTATTATCTTCTCATAAGGAGGAAGGATACTTATCACTAGAGGGCATGTGCCTTATCAAATCAAGTGAGGAGCAAGAGAGTTGTAGAAGTCAAACATGGAAAGAAGAGAGCAGCATCTCTCAAGAAGAAGAAGCTGTAGACAATGCCACTTTAGTATATGGGCAACCTTTGCCGTTTGGTGAAATTGAAAAGGACCTTCCTGATCACTCTGCAAAGATACGTTCAGAATCTAAATGGACTTTTATAACTCAGGAGGAACACCCATATTTGAACAGACCTTGGTACAAGTTACATCCATGTGGGACAAGTGAGTGGATGAAGCTGCTATTCCATGGCGATACAGCTTTGAATAAAAATGGTTTTGTTATTGAACACTATCTGGTTTCATGGTTCTCTGTCATTGGACAAGTGGTTGGTCTTAAAATCCCTTTGGGAATGTTGGAGACTCTGAGTTGCTAA 615 0.4114 MDQKESVRDITPWDGTLSSSDFFSAACAFSEKWKRFNAFVPPWLWVPSRKHHLLSSHKEEGYLSLEGMCLIKSSEEQESCRSQTWKEESSISQEEEAVDNATLVYGQPLPFGEIEKDLPDHSAKIRSESKWTFITQEEHPYLNRPWYKLHPCGTSEWMKLLFHGDTALNKNGFVIEHYLVSWFSVIGQVVGLKIPLGMLETLSC* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0775 204 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 106 198 - -
Ahy19g0775 204 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 10 104 - -
Ahy19g0775 204 Gene3D - 101 193 - -
Ahy19g0775 204 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 106 198 IPR007135 GO:0019787
Ahy19g0775 204 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 10 104 IPR007135 GO:0019787
Ahy19g0775 204 Pfam Autophagocytosis associated protein, active-site domain 106 195 IPR007135 GO:0019787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0775 Ahy-Chr19 11163303 11166997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0775 K17888 - gmx:100786914 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0775 19 11163303 11166997 Ahy2g0122 2 1333691 1337410 hybridization