Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0741 ATGAATAATAATGAAATGGAAGGCCTAAAAAGGGTTTCTAGCATGAGGAGGTGCTCCAATGTTGTTAAAACCAAAATTGTCAACAACTTGAATCCAATTTGCCATGCTGGTCAACAATTGACACTCAAGGGCAAGTTCTTCATTACTCTCACTCAGGATCAAAGAAAATCAATACCTGGAAAATTTATTTCTGTTCAGATTTACAGTGGCACAGAAGTAGATCCAATAACAGGGAAAGGGAAGCTAAGTGAGAAGGCAGTTCTCAAACATGATGGGACAAAAAAACATGACAATGGGGATGCAAAAACCATGATATATAAAATTAGAATAAATGTTTATTCACATTTTGGAACACCAAGAGCTTTTTTGATACAGAACCGATACAAGAAGAGATTCTTCCTTCAATCTGCATCAATTGAAACTTGTAACAATCATATCATTCACTTTGATTGCAATTCTTGGGTGTATCCAATCAAGAAGACCAAATCCGATAGACTCTTCTTCTCAAATGCTTGCTATATTCCAAGCGAAACGCCAAGGGCACTAATGGAATTAAGAAAGGAAGAGCTTGAAAGATTGAGGGGTGAGAGAGATGTAAATAGTAGTGAAAGTGAAGAAAGGAAGGAATGGGGAAGAATATATGAATATGATTGCTATAATGACCTTAGTGACCCTGAGAAAGGTGCTGAATATCTTAGACCTATATTGGGTGCTTCTTGGTTATATCCATATCCTCGTAGACTAAGAACAGCTCGCAAGCCTAGTGCCTCAGGTCCAGCAAATGAGAGCCGGCCAAGGAATTTTGAGATATATGTTCCTTCAGATGAGAGATTTAGTCCAAATAAAATGAAGGAACTGAAATCAAATTCTATACATGCTCTTGCACATTTCTTGTCACCCAAGGCAGCAGAACCATTACTTCATCAACAATGTTCCAAAAGCTTTGAATCATTTGAAGATATTCTTGACTTGTTCTCTGCCTCTAGGAACCAAAGAATTGAAGGGTGGGTCAGAGATAACTTAAATAAAATGTTACCAATTCAGAACTTAGAGGAAATTATTCGTCTAATCAAGAATAAACCATTAGAACTTCCTATACCTGAAATACTATCTGAAAATGCATGGGTTTGGAAAGATGACATTGAGTTTGGAAGACAAATGCTGGCTGGAACCCACCCAATCAAAATCCAATGTTTGAAGACATTCCCAACTCAGAGTTCAATAAATCCATCATTCATAGAACAGAGGCTTGAAGGATGGACACTTCCTCAGGCACTGAAGCATGGAAGATTATTCATGCTTGATCACCATGAGTACCTGTATCCATTTCTGAACAGAATAAACTTAAATGGGGTATGTGCCTATGCATCAAGGACATTCCTATTCTTAAGGAGTGATGGCATGCTTAAGCCTATGGCTATAGAACTTAGCTTGCCAGGCTCATCTCTAAGCAAGGGAATCTGCAGAGTGTTTTTCCCAGCCAAACAGGGAATAGAAGCAGCTCTTTGGCAGCTTGCTAAGGCTCATGTTCAAGCTAACGACACAGTTTATCATCAACTTATTAGCCATTGGTTACACACCCATGCAGTTGTTGAACCATTTATCATTGCCACCAAAAGAAGGCTAAGTGTGATGCACCCAATTCATAGGTTATTGAATCCTCATTTCAAAGACACAATGCATATAAATGCCTTAGCAAGAATTATCCTTATAAATTCAGGAGGAGTTCTTGAGAGAACACTATCATCTGGTGAAATCTCCATGCAATTATCTTCTGAGCTCTATAAAGAGTGGAGATTTGATGAACAAGGACTTCCTGCTGATCTAATCAAAAGGGGAATGGCCATAAAAGATGAAAACAGCCAAAGTGGGGTTCAACTTCTCTTGCAAGATTATCCCTATGCAACAGATGGGCTTGAAATTTGGGTAGCCATAAAGAAATGGGTGAAGGATTTCTGTTCATTCTATTACAAAGATGATGAGTCAATTAGGTCAGATGTTGAACTTCAATCTTGGTGGTCAGAGATCCGAACCATTGGACATGGTGACAAGCACAATGAGACATGGTGGTACCAAATTGACACAACCTCAAGTCTCGTTGAGTCACTAACAATCCTAATTTGGGTAGCTTCTGCCCAGCATGCCGCTATAAACTTTGGACAATATGCATACAATGGCTACCCTCCAAATAGGCCTACATTGTGTAAGAAATTTGTCCCAATGGAAGGTACAATCCAGTTTGGTGAGTTTTTGAAGGACCCAGACAAATACTTCCTAAAGATGTTGCCAAATAGGTTTGAGATGAGCCTTGTTGTAGCATTGTTTGATGTGCTCTCAAGGCACACCTCTGATGAGGTCTACTTGGGGTGCCAGCTGTCACCTGGTTGGATAGACAGTGAATCTATTCAAAATAGGTTTGCAGAGTTTAAGGAAGAATTGAAAGAGATTCAGGCAAGGATCTTGGAAAGAAATAGAGATCCTAAGCTTAAGAACAGGCGTGGACCAGCAAAGATTGATTACACTCTGTTATATCCTGACACCTCTAGTTCTTGGTCTAGAACAGGACTCACTTGCAGAGGGATTCCTAATAGCATTTCAATTTAA 2604 0.3925 MNNNEMEGLKRVSSMRRCSNVVKTKIVNNLNPICHAGQQLTLKGKFFITLTQDQRKSIPGKFISVQIYSGTEVDPITGKGKLSEKAVLKHDGTKKHDNGDAKTMIYKIRINVYSHFGTPRAFLIQNRYKKRFFLQSASIETCNNHIIHFDCNSWVYPIKKTKSDRLFFSNACYIPSETPRALMELRKEELERLRGERDVNSSESEERKEWGRIYEYDCYNDLSDPEKGAEYLRPILGASWLYPYPRRLRTARKPSASGPANESRPRNFEIYVPSDERFSPNKMKELKSNSIHALAHFLSPKAAEPLLHQQCSKSFESFEDILDLFSASRNQRIEGWVRDNLNKMLPIQNLEEIIRLIKNKPLELPIPEILSENAWVWKDDIEFGRQMLAGTHPIKIQCLKTFPTQSSINPSFIEQRLEGWTLPQALKHGRLFMLDHHEYLYPFLNRINLNGVCAYASRTFLFLRSDGMLKPMAIELSLPGSSLSKGICRVFFPAKQGIEAALWQLAKAHVQANDTVYHQLISHWLHTHAVVEPFIIATKRRLSVMHPIHRLLNPHFKDTMHINALARIILINSGGVLERTLSSGEISMQLSSELYKEWRFDEQGLPADLIKRGMAIKDENSQSGVQLLLQDYPYATDGLEIWVAIKKWVKDFCSFYYKDDESIRSDVELQSWWSEIRTIGHGDKHNETWWYQIDTTSSLVESLTILIWVASAQHAAINFGQYAYNGYPPNRPTLCKKFVPMEGTIQFGEFLKDPDKYFLKMLPNRFEMSLVVALFDVLSRHTSDEVYLGCQLSPGWIDSESIQNRFAEFKEELKEIQARILERNRDPKLKNRRGPAKIDYTLLYPDTSSSWSRTGLTCRGIPNSISI* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0741 867 SUPERFAMILY Lipoxigenase 174 867 IPR036226 -
Ahy19g0741 867 PRINTS Plant lipoxygenase signature 139 157 IPR001246 GO:0016491
Ahy19g0741 867 PRINTS Plant lipoxygenase signature 775 789 IPR001246 GO:0016491
Ahy19g0741 867 PRINTS Plant lipoxygenase signature 243 262 IPR001246 GO:0016491
Ahy19g0741 867 PRINTS Plant lipoxygenase signature 312 333 IPR001246 GO:0016491
Ahy19g0741 867 PRINTS Plant lipoxygenase signature 210 226 IPR001246 GO:0016491
Ahy19g0741 867 PRINTS Plant lipoxygenase signature 455 479 IPR001246 GO:0016491
Ahy19g0741 867 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 51 173 IPR036392 GO:0005515
Ahy19g0741 867 SMART LH2_4 42 170 IPR001024 GO:0005515
Ahy19g0741 867 Pfam Lipoxygenase 182 845 IPR013819 GO:0016702|GO:0046872
Ahy19g0741 867 PRINTS Lipoxygenase signature 518 535 IPR013819 GO:0016702|GO:0046872
Ahy19g0741 867 PRINTS Lipoxygenase signature 538 558 IPR013819 GO:0016702|GO:0046872
Ahy19g0741 867 PRINTS Lipoxygenase signature 500 517 IPR013819 GO:0016702|GO:0046872
Ahy19g0741 867 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 172 867 IPR013819 GO:0016702|GO:0046872
Ahy19g0741 867 Gene3D PLAT/LH2 domain 7 173 - -
Ahy19g0741 867 PANTHER LIPOXYGENASE 97 865 IPR000907 GO:0016702|GO:0046872
Ahy19g0741 867 PANTHER LIPOXYGENASE 97 865 - -
Ahy19g0741 867 Coils Coil 799 826 - -
Ahy19g0741 867 ProSitePatterns Lipoxygenases iron-binding region signature 1. 518 532 IPR020833 GO:0016702|GO:0046872
Ahy19g0741 867 Gene3D - 282 374 IPR027433 -
Ahy19g0741 867 ProSiteProfiles PLAT domain profile. 44 169 IPR001024 GO:0005515
Ahy19g0741 867 Gene3D - 376 495 - -
Ahy19g0741 867 Gene3D - 496 866 - -
Ahy19g0741 867 ProSitePatterns Lipoxygenases iron-binding region signature 2. 545 555 IPR020834 GO:0016702|GO:0046872
Ahy19g0741 867 Gene3D - 174 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0741 Ahy-Chr19 10439506 10449745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0741 53 867 Acyl Lipid Metabolism Gene Families AT3G22400 44.828 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0741 K00454 - gmx:100793997 1280.39