Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0719 ATGGCTTCCACTGCTGTTGCCACCTCCTCCGTCCCTGCCGCCGTGAGGACGGAACCGCTGCCGCAGACGTCTGATTCTTCTCCTTCCAGAACCTCCGCCGCCGCCGAGGTGTCGCTTTTATCGTCCTCACCCGCCGCCGAGGTCATTGATCGTAGCGATTCTTCCAATTCATCGCCGAACCTATTTGCTGACGCTGAAAATCAGACTATGGACGCGTTGAAGAGTGAAGAGTATCGGCAGCTGTTTCGTCTTCCACCAGATGAAGTCCTTATTGAAGATTTTAATTGTGCCCTCCAGGAAAATATACTTATTCAGGGTCATATGTACCTTTTTGTCAACTTTATATGTTTCTACTCGAACATATTTGGGTTTGAGACAAAGAGAATAATTGCATTCCCAGAAGTCACAAGTGTACGTAGGGCAAAGACAGCTGGGCTCTTTCCCAATGCCATTGAGATTCTTGCTGGCAACAGGAAGTACTTTTTCGCATCTTTCCTATCCCGTGATGAAGCTTTTAAGATTATTAATGATGGATGGTTACGGCAGGCTAATGGTACCAGAGCAGTTATTGAACAGGAGTCTATGTCCGAGTGCAGCGCCCAAGACAGTGAACTTATAGCTACTGAAAATGTCAAAGGTTCTGATATATTAGACAATGAATCTCCTTCTGCAGACCCAAGCAAGGTTACTACTAATATTATCAACGACATGGGACCTCCATCAAATATTATAGATAGCCCTGTAGTGATGAAAGTTACAGATAAACAATCCAGTACAAAACAGGTAGCTGAACCTGTATTGAATGAAGATTCTCCAGCTGCGAGTTCATGCTGGAAAGAGGAGGACATTGATGCTCCAACAACCCCAGAAGAATACACATGTGTTGCAGAAGCTGAGTTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTTTTCTCAGATGATGCTGTAAACTTTCATGAGTCTTTCCATAAAAGATGTGGTGATAAAGACTTCAAGTGTAGTTCGTGGCGTCCTCAAGAGAAATTTGGGTATGCTCGTGAACTATCTTTTCAACATCCAATAAAACTTTATCTTGGAGCAAAATTTGGTGGCTGCCATGAGCTTCAGAAATTTCGAGTGTATAAGAGCAGTCATCTGGTTATAGAGACATCACAAGAAGTCAGTGATGTACCTTATGCAGATTATTTTCGTGTTGAGGGACTGTGGGATATACAGAGACACAAGGATGACTCTTGCATTTTGAGAGTATATGTGACTGTAGCATTTTCTAAGAAAACTATTTGGAGAGGCAAAATATTACAATCAACCGTTGAAGAATGTCGAGAAGCTTATACTACTTGGATTAGCATGGCACATGACTTGTTGAAGCAGAAAAACCTAGAAAAGCAAGAAAGAGGTGCTGTTGTTGCTTTGACTCAAAATGGAAAAATCAATCCTGATATAGAGTTGGAGACTGTAGAAACTTCAGGAGCTTCACAGGAGGAATGTAACTCTACAAGGATGCAAGCTACATCTAGTGTAGCAGATGCTATTCACAAGGTTGACACCCAGATGCAAACAAGATTCATTGATACATCGTCTGTTCCTTCTTTGTTCAAAGATTATGTGAGAAAGTTAAGGTTGTCTTTGAAAAGTCAGAACAACCTCTCATTACTCATTGTTGCCATTTTTGCGCTGATTTTCTTCATGCAGTTTAGCATACTTGTGCTATTGTCAAGACCTCAACACATACATGTTAACCCTCCCGTAGACAACATAAATATGATGGAAAATGGAGTTACTAGAACTTCAGACGTGGCATGGTTGGAGAAAAGAATTCATCACCTCAAAGATGAGATGTACATGGTTGAGACTAGGCTTGAAAGGATGCGGTATGAACATGCACTCTTAAAAAAGCAACTAAATGATCTTGAGCGTAAATAA 1926 0.4143 MASTAVATSSVPAAVRTEPLPQTSDSSPSRTSAAAEVSLLSSSPAAEVIDRSDSSNSSPNLFADAENQTMDALKSEEYRQLFRLPPDEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRIIAFPEVTSVRRAKTAGLFPNAIEILAGNRKYFFASFLSRDEAFKIINDGWLRQANGTRAVIEQESMSECSAQDSELIATENVKGSDILDNESPSADPSKVTTNIINDMGPPSNIIDSPVVMKVTDKQSSTKQVAEPVLNEDSPAASSCWKEEDIDAPTTPEEYTCVAEAEFPIKVEDFFRYFFSDDAVNFHESFHKRCGDKDFKCSSWRPQEKFGYARELSFQHPIKLYLGAKFGGCHELQKFRVYKSSHLVIETSQEVSDVPYADYFRVEGLWDIQRHKDDSCILRVYVTVAFSKKTIWRGKILQSTVEECREAYTTWISMAHDLLKQKNLEKQERGAVVALTQNGKINPDIELETVETSGASQEECNSTRMQATSSVADAIHKVDTQMQTRFIDTSSVPSLFKDYVRKLRLSLKSQNNLSLLIVAIFALIFFMQFSILVLLSRPQHIHVNPPVDNINMMENGVTRTSDVAWLEKRIHHLKDEMYMVETRLERMRYEHALLKKQLNDLERK* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0719 641 CDD PH-GRAM_GRAMDC 86 179 - -
Ahy19g0719 641 SMART gram2001c 76 142 IPR004182 -
Ahy19g0719 641 Pfam VAD1 Analog of StAR-related lipid transfer domain 295 439 IPR031968 -
Ahy19g0719 641 Pfam GRAM domain 78 179 IPR004182 -
Ahy19g0719 641 Coils Coil 621 641 - -
Ahy19g0719 641 ProSiteProfiles VASt domain profile. 291 460 IPR031968 -
Ahy19g0719 641 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 14 639 - -
Ahy19g0719 641 MobiDBLite consensus disorder prediction 1 38 - -
Ahy19g0719 641 Gene3D - 74 182 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0719 Ahy-Chr19 9977524 9988356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0719 - - adu:107464474 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0719 19 9977524 9988356 Ahy19g0719 19 9977524 9988356 ECH
Ahy19g0719 19 9977524 9988356 Ahy9g0590 9 8304865 8315680 hybridization