Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0679 ATGTATGGTGGTGATGAAGTGTCTGCAATAGTAATTGACTTGGGCTCACACACATGTAAAGCTGGTTATGCTGGTGAAGATGCTCCCAAGGCTGTGTTTCCCTCTGTTGTGGGGGCAATTGATCAAATGGATATTGATGAAGCTGAGAATGGCGAAAAGAACTCCGAGTCTACTGCGGACGCCAAGAACAATGACAAACCCAAGGGAAAGCGAAAGTTGTATGTGGGATCTCAGTCCTTGGGGTACCGCAGAGACCATATGGAGGTCGTGTCTCCGTTAAAGGATGGGATTGTTGCAGACTGGGACATTGTTGACAACATATGGGATCATGCCTTCAGGGAGTGCCTCTTGATTGATCCTAAAGAGCATCCAATGCTACTTGCAGAACCTTCTTCTAACACTCAACAGCAGAGAGAAAGGGCCGCAGAGCTTATGTTTGAGAAGTACAAAGCACCTGCATTGTTTTTGGCAAAGAATGCTGTTTTGACATCTTTTGCATCAGGGCGTGCTACGTCATTGGTTGTTGATTGTGGTGGAGGATCAACTACAGTTGCACCGGTACATGATGGCTATGTTCTTCAAAAGGCTGTGGCGACCTCTCCTATTGGAGGAGAATTTCTTACAGACTGCTTGATGAAAAGCTTGGAAAGCAAGGGTATCGTGATAAAACCACGGTATTCTTTTAGGAGAAAGGAAATACGCCCTGGAGAGTTTCAGACTGTAGATATTGATTTTCCAAATACAACTGAAAGCTACAAACTCTACTCTCAGAGAGTGATTGCAAGTGATATCAAAGAATGTGTATGCCGTGCTCCAGATACTCCATATGATGATAGTGCATATTCAAACATTCCGATGACCCCATATGAGCTCCCTGATGGCCAGACAATTGAAATTGGATCTGATAGATTCAAGATTCCAGATGTTCTTTTCAATCCATCCCTAGTTCAGACAATTCCTGGCATGGAGAGCTTTGCAGAAGTTGCTCCTTCCGTTCGTGGCCTACCCCAAATGGTTATAGAAAGCATTAACAAATGTGATGTAGACATTCGAAGAGAGTTATTTAGTAGCATACTGCTTGCTGGTGGCACAGCTTCAATGCAACAACTGAAGGAACGCCTTGAGAAGGATTTACTAGAGGAATCCCCTCAAGCTGCTAGAGTAAAAGTATTAGCGAGTGGAAACGCTACTGAAAGAAGGTTTAGTGTTTGGATAGGGGGTAGCATATTGGCTTCTCTTGGCTCCTTCCAGCAAATGTGGTTCTCCAAGTCCGAGTATGAAGAGCATGGAGCTTCATATATCCAAAGGAAGTGTCCTTAA 1320 0.4417 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDEAENGEKNSESTADAKNNDKPKGKRKLYVGSQSLGYRRDHMEVVSPLKDGIVADWDIVDNIWDHAFRECLLIDPKEHPMLLAEPSSNTQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIVIKPRYSFRRKEIRPGEFQTVDIDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDDSAYSNIPMTPYELPDGQTIEIGSDRFKIPDVLFNPSLVQTIPGMESFAEVAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0679 439 MobiDBLite consensus disorder prediction 48 72 - -
Ahy19g0679 439 SUPERFAMILY Actin-like ATPase domain 5 175 IPR043129 -
Ahy19g0679 439 PANTHER - 2 438 - -
Ahy19g0679 439 PANTHER ACTIN 2 438 IPR004000 -
Ahy19g0679 439 Gene3D - 175 378 - -
Ahy19g0679 439 Gene3D - 3 174 - -
Ahy19g0679 439 Pfam Actin 4 438 IPR004000 -
Ahy19g0679 439 Gene3D Actin; Chain A, domain 4 204 317 - -
Ahy19g0679 439 Gene3D - 383 439 - -
Ahy19g0679 439 PRINTS Actin signature 162 181 IPR004000 -
Ahy19g0679 439 PRINTS Actin signature 28 37 IPR004000 -
Ahy19g0679 439 CDD NBD_sugar-kinase_HSP70_actin 10 198 - -
Ahy19g0679 439 SUPERFAMILY Actin-like ATPase domain 168 438 IPR043129 -
Ahy19g0679 439 SMART actin_3 7 439 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0679 Ahy-Chr19 9347263 9358622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0679 1 438 Miscellaneous Gene Families AT3G53750 37.868 1.46e-94 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0679 K11340 - gmx:100785066 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0679 19 9347263 9358622 Ahy9g0553 9 7735199 7746771 hybridization