Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0523 ATGAACGGTGGTGATGATAAGGTTGCAGCTCCGGCGGGTCCACCGCAACCGCTGGAGTGGAAATTCTCGCAGGTGTTCGGCGAACGTGCGGCCGGTGAAGAAGTTCAGGAAGTGGACATAATTTCTGCTATTGAATTTGACAAGTCCGGTGATCATCTAGCTACTGGTGATCGTGGCGGTCGAGTAGTTCTTTTTGAGAGGACAGATTCAAAAGATCATGGTGTACCACGAAGGGATTTGGAGAGGATGGACAATTCTCTTACTAGGCATCCTGAGTTTCGTTATAAAACAGAGTTTCAGAGTCATGAGCCTGAGTTTGACTATCTTAAGAGCTTGGAAATAGAAGAGAAAATCAACAAAATCAAATGGTGCCAAACAGCTAATGGTGCTCTGTTCCTTCTATCTACAAATGATAAAACCATCAAATTTTGGAAGGTTCAAGAAAAGAAGATCAAGAAAATTTCTGACATGAATGTTGACCATTTGAAAGCAGTGGGAAATGTCTCTAGTTCAAGTAATTCCAGTAGCTCCATTCCTTACCTTGCAAATGGAGGCTTATCAATTCCACCAGGAGGCATACCTTCACTAAAATTACCTGTGGTAACCAGCAATGAGACCAGTCTGATGGCTCGATGTCGTAGAGTGTATGCCCATGCTCATGATTATCACATCAATTCTATTTCAAATAACAGTGACGGTGAAACTTTCATATCGGCTGATGATTTGCGAATAAACCTTTGGAACCTGGAAATTAGCAATCAAAGTTTCAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACTGAGGTTATAACGTCGGCAGAATTTCACCCCACTCATTGCAACACACTGGCATATAGTAGTTCAAAAGGTTCAATTCGTCTTGTTGACTTGCGGCAGTCAGCGCTCTGTGATTCTCACACCAAAATATTTGAGGAGCATGAGGCCCCTGGCTCCAGATCATTTTTCACAGAGATTATAGCTTCTATCTCAGACATAAAATTTGCAAAGGATGGAAGACATATACTTAGTCGTGATTACATGACCCTAAAGTTATGGGACATCAACATGGATTCTGGTCCAGTTGCTACATTCCAGGTTCATGAGTATTTAAGACCAAAGCTTTGTGATTTATATGAAAACGATTCAATTTTTGACAAGTTTGAGTGTTGTCTGAGTGGTGATGGATTGCGTGTTTCAACGGGTTCCTACAGTAATTTATTCCGTGTGTTTGGTTGTGCCCCCGGTAGTGCTGAGGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGACGGCAAGTTCCAACCCCTTCAAGGCCTTCCAGATCACTGGGAACTAGTATAACACGAGTTGTAAGACGCGGAGCTGATGGAGTTGATGCAAATGGCAATTCTTTTGATTTCACAACAAAGTTGCTACACTTAGCGTGGCACCCAACTGAAAATTCAATTGCTTGTGCTGCTGCAAATAGCTTATACATGTACTATGCTTAA 1500 0.4193 MNGGDDKVAAPAGPPQPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSKDHGVPRRDLERMDNSLTRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKIKKISDMNVDHLKAVGNVSSSSNSSSSIPYLANGGLSIPPGGIPSLKLPVVTSNETSLMARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHTKIFEEHEAPGSRSFFTEIIASISDIKFAKDGRHILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSYSNLFRVFGCAPGSAEATTLEASKNPMRRQVPTPSRPSRSLGTSITRVVRRGADGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0523 499 SMART WD40_4 306 356 IPR001680 GO:0005515
Ahy19g0523 499 SMART WD40_4 105 145 IPR001680 GO:0005515
Ahy19g0523 499 SMART WD40_4 259 299 IPR001680 GO:0005515
Ahy19g0523 499 SMART WD40_4 209 248 IPR001680 GO:0005515
Ahy19g0523 499 SMART WD40_4 31 66 IPR001680 GO:0005515
Ahy19g0523 499 PIRSF PPA2_B55 11 499 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 Gene3D - 75 497 IPR015943 GO:0005515
Ahy19g0523 499 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 3 499 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 MobiDBLite consensus disorder prediction 429 448 - -
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 248 275 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 276 304 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 333 360 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 305 332 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 361 386 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 220 247 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 387 413 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 468 497 IPR000009 GO:0000159|GO:0019888
Ahy19g0523 499 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 3 499 - -
Ahy19g0523 499 Pfam WD domain, G-beta repeat 212 248 IPR001680 GO:0005515
Ahy19g0523 499 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 218 232 IPR018067 -
Ahy19g0523 499 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
Ahy19g0523 499 SUPERFAMILY WD40 repeat-like 39 491 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0523 Ahy-Chr19 6375728 6383876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0523 K04354 - gmx:100799449 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0523 19 6375728 6383876 Ahy18g0216 18 1702896 1710200 ECH
Ahy19g0523 19 6375728 6383876 Ahy19g0523 19 6375728 6383876 ECH