Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0020 ATGGAGGCCAGGATCTCATCCTCTCTTGGCCTCCCTTCTCCCAATCCCAATCCCCACCGCCACCCCACTGATTTCCCCTCCATCCTCAATCACTTCGCCGCCACCGCTACAAACCCTCCTTTCGCTTCTACCACCGCCACCGCCACATACCCCACCGCTCACAGCCCACAATGGATCCGGCCCACTTCAAAGCCCGCCCCAAAGCCCCAAACTTTGCTCAAAAACCTCACCGTCGTCGAGCGTGCACTAATCGGCGCAGCCGGTGGCGGAATCGCCGGCGCCTTCACCTACGTCTGCCTCCACCCGCTCGACACAATCAAGACCAAGATGCAGACCAAAGGAGCATCCCAACTTTACAAGAATGCCCTTGACGCGGTCGTGAAGACCTTCCAGCAAAAGGGTATTCTCGGATTTTACAGTGGCGTATCTGCGGTTATTGTTGGATCCACCGCTTCTTCTGCAGTGTATTTCGGAACCTGCGAGTTCGGTAAGTCATTTCTATCCAAAATTGAAGGGTTCCCTTCTGTGTTGATTCCACCTAGTGCTGGTGCAATGGGGAATATTATGTCTTCTGCTATAATGGTACCTAAGGAATTGATTACTCAGAGAATGCAAGCTGGTGCAAAGGGAAGATCTTGGCAGGTTTTGGTGAAGATTTTAGAAAAGGATGGGTTTTTAGGGTTATATGCTGGTTACTCTGCTACATTGCTGAGGAATTTACCTGCTGGGGTTTTGAGTTATTCATCATTTGAGTACTTGAAAGCTGCGGTTTTGAACACTACTAAGAAGTCTCACTTGGAACCTGTTCAGAGTGTGCTTTGTGGCGCACTTGCCGGCGCAATTTCGGCTTCTATAACCACTCCTTTGGATGTGGTGAAGACAAGGCTGATGACTCAGGTTCACGGAGATGCTGTGAACAAGGCTGCTGCTGTTGTGTATGGCGGGGTTTCGGCGACAGTGAAGCAGATATTAAAGGAGGAAGGGTGGGTTGGACTTACCCGTGGAATGGGGCCTAGAGTTCTTCATAGTGCTTGCTTTTCAGCATTGGGTTACTTTGCATTTGAAACTGCTAGGCTCACTATACTGCAACAATATCTGAGGCAAAAGGAGTTGAGTGAAGTGCCTGCTTCTCCTAGCTGA 1140 0.5018 MEARISSSLGLPSPNPNPHRHPTDFPSILNHFAATATNPPFASTTATATYPTAHSPQWIRPTSKPAPKPQTLLKNLTVVERALIGAAGGGIAGAFTYVCLHPLDTIKTKMQTKGASQLYKNALDAVVKTFQQKGILGFYSGVSAVIVGSTASSAVYFGTCEFGKSFLSKIEGFPSVLIPPSAGAMGNIMSSAIMVPKELITQRMQAGAKGRSWQVLVKILEKDGFLGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLNTTKKSHLEPVQSVLCGALAGAISASITTPLDVVKTRLMTQVHGDAVNKAAAVVYGGVSATVKQILKEEGWVGLTRGMGPRVLHSACFSALGYFAFETARLTILQQYLRQKELSEVPASPS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0020 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 360 IPR018108 -
Ahy19g0020 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 256 IPR018108 -
Ahy19g0020 379 MobiDBLite consensus disorder prediction 1 25 - -
Ahy19g0020 379 PRINTS Mitochondrial carrier protein signature 98 112 IPR002067 GO:0055085
Ahy19g0020 379 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Ahy19g0020 379 PRINTS Mitochondrial carrier protein signature 275 297 IPR002067 GO:0055085
Ahy19g0020 379 PRINTS Mitochondrial carrier protein signature 85 98 IPR002067 GO:0055085
Ahy19g0020 379 Pfam Mitochondrial carrier protein 87 169 IPR018108 -
Ahy19g0020 379 Pfam Mitochondrial carrier protein 265 361 IPR018108 -
Ahy19g0020 379 Pfam Mitochondrial carrier protein 182 258 IPR018108 -
Ahy19g0020 379 SUPERFAMILY Mitochondrial carrier 83 355 IPR023395 -
Ahy19g0020 379 Gene3D Mitochondrial carrier domain 211 377 IPR023395 -
Ahy19g0020 379 Gene3D Mitochondrial carrier domain 25 210 IPR023395 -
Ahy19g0020 379 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 18 372 - -
Ahy19g0020 379 PANTHER PROTEIN MITOFERRINLIKE 1, CHLOROPLASTIC 18 372 - -
Ahy19g0020 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 166 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0020 Ahy-Chr19 204934 206490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0020 83 371 EF-hand Containing Proteins AT2G35800 30.303 7.44e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0020 K15111 - pvy:116143373 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0020 19 204934 206490 Ahy19g0020 19 204934 206490 ECH