Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2982 ATGCAAAGCCTTGAATCACCTTATCTCTTTTTCTTCACTTTCCCTAAACCCTTAAACCCTCCTTCCACCTCTTCATTCCACCCTCGATACCGTCCTCCGCCACCGCCTCTGCGCCTCCACCGCCACCACCCTCCCCTCAAATGCTTCGCCTCCGACGAGTTCCCCGTCGACGAAACCTTACCCGAAAACTTCGTCCACAGGAACAAAGAAACCGAAGACGAAGCTCGCCGCCGAAACTGGATCGACCGCGGTTGGGCGCCATGGGAGGAAATCCTCACTCCCGAAGCCAATTTCGCTCGGAAGAGCCTCAACGAAGGCGAAGAGGTGCCTCTGAAAACTCCCGAAGCCATTGAAGCGTTCAACATGCTGAGCCCTAGCTACAGGAAGAAGAAGATGGAGGAATTGGGGATGGACGAGGACGAATTCTCTGAGAAGCAGTTTGAGATCAAAGGGGAGATTCCGGAGCCTATTGAGACGCTTTGGGCGGGTCCTATGGTGGTGCGCTTGGTGCCGCCGAGGGATTGGCCGCCGCGGGGATGGGAGGTGGATAGGGAGGAGCTGGCGTTCATGAGGGAGGCGCATAAGATGCTGGCCAGGAGAGTGAGTTTGGAACAACTTGAAGGTGGTGTGATTGTGGATGAAGACTATGATACTGGTGGGCTTGCATTGGATAGGTACAAGGTGTTCTTGAAGCAGTATGAGGAATGGGTTGAAGCTAATAGGGATAGGTTGGAGGAGGAATCTTATCTGCATGACCAAGATTATCACCCTGGTAGGAGGAAAAGAGGGAAAGACTACAAGGAGGGCATGTATGAGCTTCCATTCTATTATCCTGGTCAAATTTGTGAAGGGATGGTGACAACTTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGCGTATATGAGGGGTGGGTTCCCATAAAGAACAATGACTGGTATTGGATCCGCCATCACATAAAAGTGGGTATGCATGTCATGGTTGAAGTTTTGGCAAAGAGAGATCCCTACCGTTTCCGATTTCCGATCGAACTTCGGTTTGTCCATCCAAATATAGATCATCTGATCTTTAACAGATTCGAGTACCCACCAATATTTCAACGTAACGATACTAACCCAGATGAAATACGGCGAGACTGTGGAAGGCCTCCCATTCCTAGGAAAGATCCTGGAGACAAGCCGGAGGAAGAACCTTTGTTGTCAGATCACCCATATGTTGACAAGTTATGGCAGATTAATGCAGCTGAGCAAATGATTTTGACGGATATGGAGGTTAATCCAGATAAATATAAAGGCAAAAAGCTGTCAGAGTTGACTGATGAAGACGACTTTGATGAACAAAATTCTGTTCAGCATACAGAAGTCAAATATAAGAACACAATATTACCCAAGACTATTCTGAAAGTAAGTGTCAAAGAGCTTGACTTAGAGGCTGCATTTGCTGAGCGTCAGCACCATAATAAACAATTTGCGGAAGCAAAAGCCAGAGGCGAGGAGTACGAAGTTTCCAAATTAAGGCGTCACATCGAGATGGATGAGTATGATGCCATGCATTGGCGCAGATCATTTGAGGAAAGAGAAGCCCTGCTTAGAGACGTCAGCTGTCGCAAAGCGCTTGGTCTGCCATTGGAAGAACCAGGAAGGTATGTGGATGCCAGTCACTTTGGTAAAGACCAATTTGATCCTGAAAATCCTTTATATCGTTATGATTATTGGGGAGAACCCAAGAATTCAGAGAAGAGCAGGCTAGAACGCATAGCAGATCAACATAACAAATCAATTGTGGGGAAGGGCACTGTTTGGTATGAGATGTCATATGAAGACTGCATCAAGCAACAAGAAGTAAGAAAAGCTCAGGCCAAGAGAGAGAGGGAAGAAGAACGGAGGAATGCAGATAACAAGCAAGATCAGGGCTCAAATGAGGACGAAGATTCTGATTCTGATGACGACTTTGACTTTAGCCTGCTGAGAAATGTAGATGGCAACTTGTCTGAACAGATTCATGTTAATGGAACCGAGTCCTTCAAAATGTCAGACGAGGGTATGTTTGAGGAGTGA 2061 0.4711 MQSLESPYLFFFTFPKPLNPPSTSSFHPRYRPPPPPLRLHRHHPPLKCFASDEFPVDETLPENFVHRNKETEDEARRRNWIDRGWAPWEEILTPEANFARKSLNEGEEVPLKTPEAIEAFNMLSPSYRKKKMEELGMDEDEFSEKQFEIKGEIPEPIETLWAGPMVVRLVPPRDWPPRGWEVDREELAFMREAHKMLARRVSLEQLEGGVIVDEDYDTGGLALDRYKVFLKQYEEWVEANRDRLEEESYLHDQDYHPGRRKRGKDYKEGMYELPFYYPGQICEGMVTTLHLYQGAFVDIGGVYEGWVPIKNNDWYWIRHHIKVGMHVMVEVLAKRDPYRFRFPIELRFVHPNIDHLIFNRFEYPPIFQRNDTNPDEIRRDCGRPPIPRKDPGDKPEEEPLLSDHPYVDKLWQINAAEQMILTDMEVNPDKYKGKKLSELTDEDDFDEQNSVQHTEVKYKNTILPKTILKVSVKELDLEAAFAERQHHNKQFAEAKARGEEYEVSKLRRHIEMDEYDAMHWRRSFEEREALLRDVSCRKALGLPLEEPGRYVDASHFGKDQFDPENPLYRYDYWGEPKNSEKSRLERIADQHNKSIVGKGTVWYEMSYEDCIKQQEVRKAQAKREREEERRNADNKQDQGSNEDEDSDSDDDFDFSLLRNVDGNLSEQIHVNGTESFKMSDEGMFEE* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2982 686 MobiDBLite consensus disorder prediction 660 674 - -
Ahy18g2982 686 Gene3D - 276 347 IPR012340 -
Ahy18g2982 686 Coils Coil 611 638 - -
Ahy18g2982 686 MobiDBLite consensus disorder prediction 619 641 - -
Ahy18g2982 686 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 38 672 IPR044967 GO:0000427|GO:0003723
Ahy18g2982 686 ProSiteProfiles S1 domain profile. 279 347 IPR003029 GO:0003676
Ahy18g2982 686 SUPERFAMILY Nucleic acid-binding proteins 275 334 IPR012340 -
Ahy18g2982 686 MobiDBLite consensus disorder prediction 372 401 - -
Ahy18g2982 686 MobiDBLite consensus disorder prediction 369 401 - -
Ahy18g2982 686 MobiDBLite consensus disorder prediction 619 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2982 Ahy-Chr18 134993523 134999556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2982 - - gmx:100783002 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2982 18 134993523 134999556 Ahy18g2982 18 134993523 134999556 ECH