Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2962 ATGGCACCGCACGATCTCCGCCGTCCATTCAAACGACCGTTGATCTCTGATCAAGAGAAGCGCAGGCAGCAGTCCCTGCTCCGGCAGGCACAGAATCGACGCGACGCCCAGAACCATGCTCGATTCCTCGCCTCCACCGCCTTATCGCTCGAACAACCGCACGAACTCGAACCCGAACCCGTATCAGCACCCGAACTTCACGACGAACTTATACCTGACTCTGAAGCTCCCGAGTCACCGAAGGAGCTTGACGTGGTTGAAGCGTCGAAGCTGAAAGGCGCGGAGGCTCGGAAATGGTTCGCGAAACAGCTGATGCATCCCGAATGGATGATCGACATTCCCGAAAATCTCTCACAAGACTGGTTTGTGTTTGCTAGGCCTTCTGGAAAACGATGCTTTGTGGTTTCGTGCAACGGCACGACGATAAGTCGTTTAAGGAACGGTTCGATACTGCACCGTTTTCCGTCGGAGTTACCGAATGGTGCGAGAAGAAAGGATTCCTCTGGTCCTGCTCAGTCTTACTCCATTTTGGACTGCATTTTTCACGAGGTGGATCAGACTTACTATGTGATTGACATGGTTTGCTGGCGGGGCTACTCGCTTTATGATTGCGCTGCAGAATTTAGGTTTTTCTGGTTGAATTCCAAGCTTGCTGAGACTGGCGCTTGTGAACCTCCCTCGCATTATCACAAGTACAGGTTCAGTTTGGTTCCAGTGTACTGCTGCGACCAGAGTGGTTTATGTGCTGCTTATACTGGATCTGTGCCTTATGTCAAAGATGGTCTTCTGTTTTATAACAAGCATGCACACTATCAGACAGGAATTACACCACTAGCATTGGTTTGGAAGGATGAGAACTGCAGTCAGTATGTCATGGACACAGATAGCAAAGGACAGGTTCCAAATCATCAGCAGGTGGTTTTGGAGCTACAAGAAGGTGGAAAGCTGTGCACTTCCGATGATCCTCCTGTAGTATTTGGATGTTTAGATGGAGGCTTTATGCATGAGTCAGAGTTGCATTCAGGATGTCTTGTACGGTTTGCAATTGGAGAAGGGGGACTGGTTTTGGTGGATGGAAAACTTGAGAAAGCTGATCTAAATTATCTAGGCAAGGCCAACCGTGCTCGTGCTTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAATACAGTGTTCGACACTCTCCTCTAAGAATTGATGATTTGTTAGGATCTGTCAACTCAGCAGCTGATGAAAGTAACAAAGTTTGTGATATTGAAATGGATGGTTGA 1269 0.4807 MAPHDLRRPFKRPLISDQEKRRQQSLLRQAQNRRDAQNHARFLASTALSLEQPHELEPEPVSAPELHDELIPDSEAPESPKELDVVEASKLKGAEARKWFAKQLMHPEWMIDIPENLSQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILHRFPSELPNGARRKDSSGPAQSYSILDCIFHEVDQTYYVIDMVCWRGYSLYDCAAEFRFFWLNSKLAETGACEPPSHYHKYRFSLVPVYCCDQSGLCAAYTGSVPYVKDGLLFYNKHAHYQTGITPLALVWKDENCSQYVMDTDSKGQVPNHQQVVLELQEGGKLCTSDDPPVVFGCLDGGFMHESELHSGCLVRFAIGEGGLVLVDGKLEKADLNYLGKANRARASADSFSKVMFQYSVRHSPLRIDDLLGSVNSAADESNKVCDIEMDG* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2962 422 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 100 283 - -
Ahy18g2962 422 Gene3D DNA ligase/mRNA capping enzyme 2 309 - -
Ahy18g2962 422 MobiDBLite consensus disorder prediction 1 62 - -
Ahy18g2962 422 CDD Snurportin-1_C 99 285 - -
Ahy18g2962 422 MobiDBLite consensus disorder prediction 29 45 - -
Ahy18g2962 422 MobiDBLite consensus disorder prediction 1 28 - -
Ahy18g2962 422 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 421 IPR017336 GO:0005634|GO:0005737|GO:0061015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2962 Ahy-Chr18 134703633 134707381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2962 K13151 - gmx:100801927 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2962 18 134703633 134707381 Ahy18g2962 18 134703633 134707381 ECH
Ahy18g2962 18 134703633 134707381 Ahy8g2710 8 50613315 50616873 hybridization