Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2959 ATGAGAAGGCCATTGAGACAAGTGAGCTGCCACCACAACAAGAAGAAGAAGCAGGACCTCTTGGACGCTCTTCCAGACGACGTCGTCGTTTCAATTCTCTCTAAGCTCACCTCCACTGCCTCTTCTCCTTGCGATCTAATCAACGTTCTTTCCACATGCAAGAGATTGAACCGTTTAGGCCTGAACCGTGTCGTTTTATCCAAAGCTGGTCCAAAACTATTCGCCATTAAAGCCAAAAACTGGTCGGAATCAGCTCACCGGTTTCTCAGAAACTGCGTTAACGCCGGGAACCTCCACGCATCCTACACTCTCGGAATGATCCGATTTTACTGTTTGGAAAACAGGGAGAGCGGGTTATCGTTGATGGCGAAGGCTGCGATGAAATCTCACGCGCCGGCTCTGTACTCTTTGGCGGTTATACAGTTCAACGGCAGCGGAGGCACGAAAGGCGACAAGGACCTACGCGCGGGCGTGGCGCTGTGCGCACGCGCCTCGCTTCTCGGCCACATTGACGCGCTCAGAGAGCTCGGACACTGCCTCCAAGACGGTTACGGCGTTCGCCAGAACGTGGCAGAGGGAAGAAAGCTCCTCGTCCAGGCAAACGCGCGAGAGCTCGCGTTCGTGTTACGCGCGGTGGCGCGGTCTTCCTCTTCGGCGTCGTTGCTGACGTGGCGAAACACGCTGAGCAACCATTCGTCGTCGGCGGCGTCGGTTTCGGCTGCAGTGTGTCCGTTGCTTAGTGATTACGGTTACAGTGTTGCGGTTCCCGAGGTTCAACCGGCGAATTGGTTTCTGAGAGAGTGGTTTGAATCGGGTCGGGGAAGATTGGGAAACGGTTTGAGGCTTTGCGCGCACATCGGGTGCGGGCGACCCGAGACCCGGCCTCACGAATTTCGAAGGTGCTCGGTTTGCGGTAAGGTGAATTACTGCTCGAGAGGGTGTCAGGCGTTGGATTGGAAGCTGCGGCATAAGATGGAGTGTTCGCCGGCGGATATTTGGCCGGAGGAGGAGGACGGTGGTGGTGCGGTTGTTGTTGGTGGTGGCGACGGCGATGGAGTAGGAAACGACGTGGACGTGAGAAACGGCGTCGTTTGA 1095 0.5635 MRRPLRQVSCHHNKKKKQDLLDALPDDVVVSILSKLTSTASSPCDLINVLSTCKRLNRLGLNRVVLSKAGPKLFAIKAKNWSESAHRFLRNCVNAGNLHASYTLGMIRFYCLENRESGLSLMAKAAMKSHAPALYSLAVIQFNGSGGTKGDKDLRAGVALCARASLLGHIDALRELGHCLQDGYGVRQNVAEGRKLLVQANARELAFVLRAVARSSSSASLLTWRNTLSNHSSSAASVSAAVCPLLSDYGYSVAVPEVQPANWFLREWFESGRGRLGNGLRLCAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKMECSPADIWPEEEDGGGAVVVGGGDGDGVGNDVDVRNGVV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2959 364 SUPERFAMILY F-box domain 7 68 IPR036047 GO:0005515
Ahy18g2959 364 Gene3D - 275 331 - -
Ahy18g2959 364 SUPERFAMILY HIT/MYND zinc finger-like 281 329 - -
Ahy18g2959 364 Gene3D Tetratricopeptide repeat domain 61 219 IPR011990 GO:0005515
Ahy18g2959 364 Pfam MYND finger 288 327 IPR002893 -
Ahy18g2959 364 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 7 342 - -
Ahy18g2959 364 SUPERFAMILY HCP-like 83 200 - -
Ahy18g2959 364 PANTHER MYND DOMAIN-CONTAINING 7 342 IPR044508 -
Ahy18g2959 364 ProSiteProfiles Zinc finger MYND-type profile. 285 327 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2959 Ahy-Chr18 134657735 134659350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2959 - - adu:107463542 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2959 18 134657735 134659350 Ahy8g2707 8 50575706 50577314 hybridization