Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2955 ATGGCGGCAGCCACTTCCAGAACCCCATTCTCCACCGTATCTCCATCTTCTTCCACTTCCTCTTCTCACTCCACCTTCCCAAACCGTATTCTCAGATCCACGCTCCCATTTTCCTCCATTCTCACCAATAATAAGAAGCACCATTCCCTCAAAATATCAAACACCATCTCAAACAACCCTAAACCACGACCACCATCCGCTACCACCACCACCACCACCACCACCACCACACCAACCACCGCACCCTCCATCGCCACTCGTCCTCCCGCCGGCGAGCCTCGCAAGGGCGCAGATATCCTCGTGGAGGCTCTGGAGCGTGAAGGCGTAACCACCGTCTTCGCCTACCCCGGCGGCGCGTCGATGGAGATCCACCAAGCTCTGACGCGCTCCGCCGTCATCCGTAACGTCCTCCCCCGCCACGAACAAGGCGGCGCCTTCGCCGCCGAGGGTTACGCCCGCTCCTCCGGCCTCCCCGGCGTCTGCATCGCCACCTCCGGTCCCGGCGCCACCAACCTCGTCTCCGGCCTCGCCGACGCGATGATGGACTCAATCCCTATCGTTGCCGTGACCGGCCAGGTTCCCCGCCGCATGATCGGAACCGACGCATTTCAAGAAACCCCAATCGTTGAGGTAACTCGATCTATCACGAAGCATAATTACCTTGTTCTTGATGTTGATGAAATCCCTAGGATTGTTAGAGAGGCATTTTTTGTAGCTACTACTGGTAGACCTGGACCTGTTTTGATTGATGTTCCTAAAGATGTTCAGCAACAATTGGCGGTTCCCAATTGGGATTTGCCTGTTAGGGTTGCTGGTTATGTTTCTAGGATGCCAAAGATTCCCAGTTTGGCGGAATTAGAGAGCGTTGTGAGGCTAGTTTCGGAGGCGAAGAAACCGGTTTTGTATGTTGGTGGTGGGTGTTTGAATTGTAGTGAGGAATTGAGAAGGTTTGTGGAGATTACGGGTATTCCGGTAGCGAGTACTTTGATGGGACTTGGTGTTTACCCTGTTGGTGGTGATGATTCTCTTCAGATGTTGGGGATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAAGAGTGATTTGTTGCTTGCATTCGGGGTTAGGTTTGATGATCGTGTAACTGGGAAGCTTGAGGCTTTCGCGAGTAGGGCGAAGATTGTGCACATTGATATTGATTCTGCTGAGATTGGGAAGAACAAGATCCCACACGTGTCGATTTGCGCAGATGTGAAAGTGGCATTGGAAGGGATCAATGGGATCTTGGAGGAAAAGGGGGTCAATAAAAAGAATCTTGGTCTTGAGGATTGGAGGGAAGAGCTGAGTGTGCAGAAGCAGAAGTTCCCATTGAGTTATAAGACTTTTGGTGATCTGATTTCGCCGCAGCATGCAATTCAGGTTCTTGATGAGCTCACAAATGGGGATGCAATCATTAGTACCGGTGTAGGTCAGCATCAGATGTGGGCAGCACAGTTTTACAAGTACAAGAGGCCGAGGCAGTGGTTGACATCAGGGGGTCTTGGCGCTATGGGTTTCGGCTTGCCTGCTGCAATTGGCGCAGCTGTGGCTAACCCTGGAACTGTCGTTGTTGACATCGATGGGGATGGTAGCTTCATCATGAATGTACAAGAGTTGGCAACCATAAAGGTGGAGAATCTACCGGTTAAGATTCTGTTGTTGAATAATCAGCACTTGGGTATGGTTGTTCAGTGGGAAGACAGGTTCTACAAGTCCAATAGAGCTCACACATACCTCGGCAACCCTACGAATGAGGCTGAGATCTTTCCAAACATGTTGAAGTTCGCCGACGGTTGTGGAATACCAGCAGCACGTGTGACGAAGAAGGAAGATCTTAGAGCCGCAATCAAGAAGATGCTGGACACGCCCGGCCCTTACCTTCTTGATGTGATTGTGCCTCATCAAGAGCATGTCTTGCCAATGATCCCAAGTAATGGATCCTTCAATGATGTGATTACTGAGGGTGATGGAAGAACGAAATACTGA 2007 0.5077 MAAATSRTPFSTVSPSSSTSSSHSTFPNRILRSTLPFSSILTNNKKHHSLKISNTISNNPKPRPPSATTTTTTTTTTPTTAPSIATRPPAGEPRKGADILVEALEREGVTTVFAYPGGASMEIHQALTRSAVIRNVLPRHEQGGAFAAEGYARSSGLPGVCIATSGPGATNLVSGLADAMMDSIPIVAVTGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDEIPRIVREAFFVATTGRPGPVLIDVPKDVQQQLAVPNWDLPVRVAGYVSRMPKIPSLAELESVVRLVSEAKKPVLYVGGGCLNCSEELRRFVEITGIPVASTLMGLGVYPVGGDDSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKVALEGINGILEEKGVNKKNLGLEDWREELSVQKQKFPLSYKTFGDLISPQHAIQVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPGTVVVDIDGDGSFIMNVQELATIKVENLPVKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGNPTNEAEIFPNMLKFADGCGIPAARVTKKEDLRAAIKKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFNDVITEGDGRTKY* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2955 668 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 91 270 IPR029061 -
Ahy18g2955 668 Pfam Thiamine pyrophosphate enzyme, central domain 287 417 IPR012000 GO:0000287|GO:0030976
Ahy18g2955 668 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 95 660 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Ahy18g2955 668 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 63 667 IPR045229 -
Ahy18g2955 668 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 482 637 IPR011766 GO:0003824|GO:0030976
Ahy18g2955 668 SUPERFAMILY DHS-like NAD/FAD-binding domain 283 450 IPR029035 -
Ahy18g2955 668 ProSitePatterns Thiamine pyrophosphate enzymes signature. 519 538 IPR000399 GO:0000287|GO:0030976
Ahy18g2955 668 MobiDBLite consensus disorder prediction 52 84 - -
Ahy18g2955 668 MobiDBLite consensus disorder prediction 52 94 - -
Ahy18g2955 668 CDD TPP_AHAS 460 651 IPR039368 GO:0030976
Ahy18g2955 668 Gene3D - 452 638 - -
Ahy18g2955 668 MobiDBLite consensus disorder prediction 1 27 - -
Ahy18g2955 668 Gene3D - 286 451 - -
Ahy18g2955 668 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 460 660 IPR029061 -
Ahy18g2955 668 Gene3D - 86 277 - -
Ahy18g2955 668 PANTHER ACETOLACTATE SYNTHASE 63 667 - -
Ahy18g2955 668 CDD TPP_PYR_POX_like 98 253 - -
Ahy18g2955 668 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 95 258 IPR012001 GO:0030976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2955 Ahy-Chr18 134617957 134620299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2955 K01652 - gmx:100782250 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2955 18 134617957 134620299 Ahy18g2955 18 134617957 134620299 ECH
Ahy18g2955 18 134617957 134620299 Ahy8g2704 8 50531613 50533942 hybridization