Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2940 ATGGAGGACTCACCGTCACCGTCGACATCGACATCGAGACAGAGCAAGAAGGCGGAACTTTCGAATGACGCTAACGTCACCGGGAACGGTGGAAGTTTCGGTTCGGTGAACGAGGACCTTCTCCAGAACATTCTGGCGAGGCTCCCGGCTCGTTGGTTCGCTTCCGCTGCTTGCGTCAGCAAATCATGGAGCTCTGTCTGCAATCGAATCCTTACTCGTCCAAAGCTCTCTTCTGCTCTTTCTCTCAATCCTTCACTTTCCGAAGCTGTAGATGATGTTCTTCAGAAGGTTCTGTGTGAGCCGATTCGGCCTCATTTTGCCATTGTCAATGTTGGAAGTGGATTTGACTTGGAGAAGATAATGCATCTTATAAGAAAGACCCTGGGATGCAACATTCCGATTATTGTTACCGTGTCAAATGGTATTATAGGAAGGGATGCACTCACTAGTGAATTTAAAGAGGTCAAATGGGGAGCCCTTTTTAGTGGTTTTGAGGGTGAATCTTACGCAAGAAATGTAAATGAAGGCATATTATTGACAGTTGGCTACCTTCCAGGATTAAAGGTTGAAGCTATACCATTACGGCATCCAACCCGGATATATTCATCAGTGTGTGTTGACGATTTTATAAAGGATATCAAGGAATATTCAGCCTCTGTCTCCAACTGCCCATTTCCAGTTGGGATTATATTATTTGGAAAAGCAAATGGTGACATGAATCCAGTTATGGAGAAGCTAGATTGTGCCATGCCAAGAGACACTGTTATTGTAGGTGATGAGAGGGGCTGCTTTATATACAGAAGTGGAAATGCTAAAAGGAATACAATTGGGTCCTTAGATGCTATTGCTCTTGTATTTGCTCAGGATAGAGACAGGTCTTCAGGAAATATTAAATTTCATGTTGCATTGTCAAATGGTGTTTCACCTGTGGGTACAACATACAAGGCAGCTTCAGTCAGAACAAGCAACACTGATTGTTCAACATGGTTAACTGCCAAGAGGGAAGGGCAACAACAACTTCTTGATGGTCAAAGTATTCTGGATGACATTAACAATTTGCTGGAAAATCATATTGCATCACCTGATTTGTACATTGGGGTGATTAAAAACAGAAAAGTCTCGATAGAAGGAGGGAAGCCAACACCAAGATCTTGTATTGCATATCATGGAGTTGTGGGAGGTGATGAAGAGTACCTCTACGTTGATGGAACTGGCATGAAAACAGGAGATATCTTCCAATTCTACTATTCTGATCCTAATGCCGCACAAGCTTCAGTTACTAAGGTCCATGATGCTCTGAAGAATATTAAGCTCAAGGGTGAAGGAAACAATAGTTGTGTTTTTGGGGGCCTTGTGTTTGCTTGTTATGGCCGCGGCGAATCATTCTTTGGATGTCACAATGTGGATAGCTCCCCGCTCTTAGAGTGTTTTCCAGGGCTACCAGTGGCCGGAGTATTTTGTGGCGGAGAAATCGTGCGTCCTTTTACTACTATGATTAGTCGAGAAGGAAGCCATGTTAACTGCTGTCTGCATGTTTACAGCTCTGTATATTTGGTAATGTCATATACCCCTCCATCTATGGGATGTTAG 1590 0.434 MEDSPSPSTSTSRQSKKAELSNDANVTGNGGSFGSVNEDLLQNILARLPARWFASAACVSKSWSSVCNRILTRPKLSSALSLNPSLSEAVDDVLQKVLCEPIRPHFAIVNVGSGFDLEKIMHLIRKTLGCNIPIIVTVSNGIIGRDALTSEFKEVKWGALFSGFEGESYARNVNEGILLTVGYLPGLKVEAIPLRHPTRIYSSVCVDDFIKDIKEYSASVSNCPFPVGIILFGKANGDMNPVMEKLDCAMPRDTVIVGDERGCFIYRSGNAKRNTIGSLDAIALVFAQDRDRSSGNIKFHVALSNGVSPVGTTYKAASVRTSNTDCSTWLTAKREGQQQLLDGQSILDDINNLLENHIASPDLYIGVIKNRKVSIEGGKPTPRSCIAYHGVVGGDEEYLYVDGTGMKTGDIFQFYYSDPNAAQASVTKVHDALKNIKLKGEGNNSCVFGGLVFACYGRGESFFGCHNVDSSPLLECFPGLPVAGVFCGGEIVRPFTTMISREGSHVNCCLHVYSSVYLVMSYTPPSMGC* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2940 529 PANTHER F-BOX ONLY PROTEIN 22 32 526 - -
Ahy18g2940 529 SUPERFAMILY F-box domain 38 69 IPR036047 GO:0005515
Ahy18g2940 529 SMART FIST_C_2 346 494 IPR019494 -
Ahy18g2940 529 Pfam FIST N domain 115 319 IPR013702 -
Ahy18g2940 529 Pfam FIST C domain 405 492 IPR019494 -
Ahy18g2940 529 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 32 526 - -
Ahy18g2940 529 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2940 Ahy-Chr18 134451461 134456627 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2940 - - gmx:100815778 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2940 18 134451461 134456627 Ahy8g2696 8 50416209 50423924 hybridization