Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2938 ATGCAACTTACATCAATGGTGGCATCCATCAATTTAGGGTTACAATTTCCATGTAGCTTGAGCAACAATGTGGTTAAGCTAGGGTTTCATTCTTCATCACCATCACCTAATAATAAGAGAAGAGTTTCATTAATGGTGAATGCAAATTCTAATAGAAGATTAGGAGGAACAATAAATAATGGAGAAAATAATAACATAAATAATAAAAATTATAAGGTGAATGGGGTGCGTGTGGCAGAGGCTCCTCTGACTTTGAGAAAATTAAAGGAAGATTCAGCAGAGGAAGCTCTTGTAACTTGCATGCATGGAAGGTTTCAGGAGGGTATTTTCGTCTATAGGCAGATTTTTGCTATAAGGTCTTATGAGATTGGACCAGATCAAACTGCTACTATGGAGACCATCCTCAATTTTCTTCAGGAAACTGCTCTAAATCATGTGGCGAACTCTGGAATAGGTGGGATTGGATTTGGAGCAACACGCCAGATGAGCATTCGAAAACTCATCTGGGTTGTTACTCGCATTCAGGTTCAAGTCCAGAGATATAGCAGTTGGGGAGATATAATTGAAATTGATACTTGGGTTGATGCACATGGAAAGAATGGAATGCGCAGAGATTGGGTAATTAGAGATCACTTCACTAAAGAAGTCATTGTAAAAGCTACAAGTACGTGGGTGATGATGAATAGAGAAACAAGAAAACTTTGCAAGATACCTGAAGAAGTAAGGGAAGAGCTTACTCCATTTTATATTAATAGGTTTGCTATTTCTAATGAAGACACAGATTCTGAAAAGATTCACAAGCTTACTGATCAAGATGCTGAGAACATCCAAACTGGATTGGCTCCAAGGTGGAACGACATGGATGCTAACCAGCATGTGAACAATGTGAAATACATTGGATGGATTTTGGAGTCCTTGCCAATGAAAGTGCTAGAAGATTATTACATGACAAGCATGACATTGGAGTTTAGGAGAGAGTGTACACAATCTAACATGTTGGAATCAATGGCGACTCCAACATCAAAGCTCATTCATGGAAACAATTCCATCAATATAAAAGTAAACAGCAATTTGCAATTCACACACTTGCTTCGTCTTTTAGATGATGATCAAAGACCTGAAGTTGTTAGAGCCAGAACTGAATGGCATTTCAAGAACTATGCTAATTCAATTTAA 1176 0.3784 MQLTSMVASINLGLQFPCSLSNNVVKLGFHSSSPSPNNKRRVSLMVNANSNRRLGGTINNGENNNINNKNYKVNGVRVAEAPLTLRKLKEDSAEEALVTCMHGRFQEGIFVYRQIFAIRSYEIGPDQTATMETILNFLQETALNHVANSGIGGIGFGATRQMSIRKLIWVVTRIQVQVQRYSSWGDIIEIDTWVDAHGKNGMRRDWVIRDHFTKEVIVKATSTWVMMNRETRKLCKIPEEVREELTPFYINRFAISNEDTDSEKIHKLTDQDAENIQTGLAPRWNDMDANQHVNNVKYIGWILESLPMKVLEDYYMTSMTLEFRRECTQSNMLESMATPTSKLIHGNNSINIKVNSNLQFTHLLRLLDDDQRPEVVRARTEWHFKNYANSI* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2938 391 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 276 387 IPR029069 -
Ahy18g2938 391 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 111 254 IPR029069 -
Ahy18g2938 391 Gene3D Hotdog Thioesterase 104 387 - -
Ahy18g2938 391 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 42 386 - -
Ahy18g2938 391 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 42 386 IPR045023 GO:0006633|GO:0016297
Ahy18g2938 391 Pfam Acyl-ACP thioesterase 111 383 IPR002864 GO:0006633|GO:0016790
Ahy18g2938 391 CDD 4HBT 110 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2938 Ahy-Chr18 134410146 134415378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2938 103 385 Acyl Lipid Metabolism Gene Families AT1G08510 51.590 2.22e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2938 K10781 - gmx:100791281 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2938 18 134410146 134415378 Ahy18g2938 18 134410146 134415378 ECH
Ahy18g2938 18 134410146 134415378 Ahy8g2692 8 50378831 50382808 hybridization