Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2935 ATGGAGCTCTCAAAAGACCCGAATTCCAACCCGGGTCGAACCGAAGACTCCGATTCGGAGCTCGAACTCTACACTATCCCAAGCTCTTCAAGGTGGTTCGCATGGGACGAAATCCACGAGACAGAGAGAACAACGCTGAGAGAATTCTTCGATGGAACATCCATGTCGCGCTCACCCAAGATCTACAAGGAGTACAGAGACTTCGTCATCAACAAGTACAGGGAAGATCCTACGAGGAAGCTCCTCTTCACCGACGTCAGAAAATCACTCGTCGGCGACGTCACGCTCCTCCGCAAGGTCTTCACGGCGCTCGAAGGTTGGGGTTTGATCAACTACGGCGCAACCTCAGGGGACACCGACGCGGAAGGTTGTGGTGGTGGTGCTGAGGACGAAGGGTGGAGGGTTAGGGTTGAGGAAGGTGCGCCCAATGGGATAAGGGTAGTTGCGACACCGAACTCGCTGAAGCCGATTACACTGCCACGTGGCGCAAAGACGACTAAGGATGGTTCGGGTTCGGGTTCGGGTTCGGGTTTTAGTTCGGATTGTGTGAAATTGCCGCCGCTGGCGAGTTACTCGGATGTGTATGGGGATTTGATGAAGCAGAAGGAGGAGATGAATTGTGGGCTCTGTGGTGATAAAATTGGTTCTGGACATTACCGAAGTACCAAGGATAATTTCATGATTTGTGCAAAATGTTTCACAAATAAAAATTATGGAGATAATAGGTCTGCGGAGGATTTCACATTAACAGAGTCCGGTGAAAATAGTGGCGAACAGGGAGCTGTGTGGACTGAGGGAGAAACACTTCTCCTTTTAGAATCTGTTATGAAGCATGGAGATAACTGGGACCTAGTTGCTCAAAGTGTTCAAACAAAGAGTAAACTTGATTGCATCTCAAAACTCATTGAGCTGCCCTTTGGGGAGCTCATGTTGGGCTCTGCTCACCGAAATGGTAACAGTAATAGTGTTAATGGCTACGTGAACAATGTGAAACAAGTTCAGTCATCATCATCATCGTCTAACCATCAAGAAACTTCAAAGGCGCAGGATCAGTCTCACGATCTTAGGAATGAAAACGAGCAGAATGGAGATGCTGTTGAGGAAAGTCCTTCAAAAAGACAACGCGTTGCTCCTCTTTCAGATACCAGCAGTTCACTATTGATGCAGGTGGGGCTTATTGCTAGTGTGGTTGATCCTCATATCACAGCGGCTGCAGCTGATGCTGCTACTATGGCACTTTGTGATGAGAACCTGTGTCCAAGGGAGATATTTGATGTTGAAGAGGATTATGCTCTTAGCGTGAACTCTGCAAATAATTCAGCAAGAGCCCATGGGGATGAAGGTGTAGAGATGAAGTCGTCCAATCAATCAGAAATAGACGACAGAGGCCAAAAGGATGGCATACCCTTGACACTGCGTGTAAGAGCCGCCATTGCAACTGCTCTCGGAGCTGCTGCTGCACGAGCAAAGTTATTAGCTGACCAGGAAGACAGAGAGGTTGAACTTTTAGTAGCTACTATAATTGACGCACAGGTTAAGAAATTGCAACACAAGGTTAGACATTTTGATGATCTGGAGCTGTTGATGGAAAAGGAACATGCTGAAATAGAGGAGCTAAAAGATTCTATCTTAACTGAACGGATTGATGTTTTAAGGAGGACATTTAGATCTGGAATCACTAGACGGAAAGATTATTCTTATGTCAAATCTTAG 1713 0.4676 MELSKDPNSNPGRTEDSDSELELYTIPSSSRWFAWDEIHETERTTLREFFDGTSMSRSPKIYKEYRDFVINKYREDPTRKLLFTDVRKSLVGDVTLLRKVFTALEGWGLINYGATSGDTDAEGCGGGAEDEGWRVRVEEGAPNGIRVVATPNSLKPITLPRGAKTTKDGSGSGSGSGFSSDCVKLPPLASYSDVYGDLMKQKEEMNCGLCGDKIGSGHYRSTKDNFMICAKCFTNKNYGDNRSAEDFTLTESGENSGEQGAVWTEGETLLLLESVMKHGDNWDLVAQSVQTKSKLDCISKLIELPFGELMLGSAHRNGNSNSVNGYVNNVKQVQSSSSSSNHQETSKAQDQSHDLRNENEQNGDAVEESPSKRQRVAPLSDTSSSLLMQVGLIASVVDPHITAAAADAATMALCDENLCPREIFDVEEDYALSVNSANNSARAHGDEGVEMKSSNQSEIDDRGQKDGIPLTLRVRAAIATALGAAAARAKLLADQEDREVELLVATIIDAQVKKLQHKVRHFDDLELLMEKEHAEIEELKDSILTERIDVLRRTFRSGITRRKDYSYVKS* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2935 570 MobiDBLite consensus disorder prediction 165 179 - -
Ahy18g2935 570 MobiDBLite consensus disorder prediction 1 20 - -
Ahy18g2935 570 SMART sant 259 307 IPR001005 -
Ahy18g2935 570 MobiDBLite consensus disorder prediction 347 371 - -
Ahy18g2935 570 ProSiteProfiles SANT domain profile. 258 309 IPR017884 -
Ahy18g2935 570 SUPERFAMILY Homeodomain-like 30 113 IPR009057 -
Ahy18g2935 570 ProSiteProfiles SWIRM domain profile. 24 121 IPR007526 GO:0005515
Ahy18g2935 570 PANTHER SWI/SNF COMPLEX-RELATED 18 561 - -
Ahy18g2935 570 SUPERFAMILY Homeodomain-like 260 310 IPR009057 -
Ahy18g2935 570 Pfam SWIRM domain 27 112 IPR007526 GO:0005515
Ahy18g2935 570 MobiDBLite consensus disorder prediction 332 346 - -
Ahy18g2935 570 Coils Coil 522 542 - -
Ahy18g2935 570 Gene3D - 259 307 - -
Ahy18g2935 570 Gene3D - 30 116 IPR036388 -
Ahy18g2935 570 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 18 561 - -
Ahy18g2935 570 MobiDBLite consensus disorder prediction 445 464 - -
Ahy18g2935 570 MobiDBLite consensus disorder prediction 440 464 - -
Ahy18g2935 570 CDD SANT 263 300 IPR001005 -
Ahy18g2935 570 Pfam Myb-like DNA-binding domain 263 301 IPR001005 -
Ahy18g2935 570 MobiDBLite consensus disorder prediction 332 380 - -
Ahy18g2935 570 ProSiteProfiles Myb-like domain profile. 255 297 IPR001005 -
Ahy18g2935 570 MobiDBLite consensus disorder prediction 156 179 - -
Ahy18g2935 570 Pfam SWIRM-associated region 1 480 554 IPR032451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2935 Ahy-Chr18 134374701 134378168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2935 K11649 - gmx:100790238 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2935 18 134374701 134378168 Ahy18g2935 18 134374701 134378168 ECH