Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2930 ATGAACAAGAGGAAGAGAGAAGAAGAAGAAGAAGAAGGAATCAGAATGGGAACGGATATCGTGTGGCAAACCCCAGCGAATCCCCCGCACCCTCACGACTACATCTTCCGAAACGGAATTCGATATGTTAAACCTTACTACTTCGAATTCATAGCTCATGTTAAGAATCGGTGGGCTGGGAAAACTATTGTGGATTTATTCGCCCAAGAGTTCAAAGGTCGACCTTATGAATATTATGTTAGTGCAGTGAAATGTGGAAGGATTCAAGTTGATGGTGAGAGGGTATCAGTTTCATACATAGTTAAATCATCACAGAAGATTAGCCATTTCGTACACAGGCATGAACCGCCTGTGATGGCTTGTGAGGTTCCAATTCTCCAAAAAGAACTAGACGTGCTGACTGTTTGTAAACCTGCATCTGTCCCTATTGAAGGTGGCTTAGTCCGGAAAAAGTATATAGCAAGAGTAGTTGGAGAATTTCCCAAGGATGAGCTAGTTGTTGATGCCAATATAGACTATAATGCTCGGGAAGGGAGGAGCACAGCGGAGGTCAGGGACTCTGCGAAGGGCAAGGCAGCCTCTACAAAATTTACTCGGATATCTTCTAATGGTGCTCAGAGTATTGTTTTATGTGAACCAATCACTGGTCGTACTCATCAGATTCGTGTTCATTTAAAGCATTCAGGACACCCAATAGCCAATGACATGCTGTACATATCAGATGAAACTGTCGATCGATCAAGTAAAGGTTCAAGTGCTGATAGATCAGCTTGCACATCTGCCACTGCTCTAACATCAAGTATTGAGGAAAAAGTCGTCAATGATTGTGAAGAGAAGTCCAATGTGGGTTTTAGCATTGATCCCATGTGTACAAACTGTCCAAATTTGGCACCAAAAGGATATGATACCGACGAAGAAGGTCTATGGTTACATTGTATTCAGTACTCTGGCCCTGATTGGACATATGAATGCCCATATCCTGATTGGGCCAAACTCACTCAGACAACTTAA 1011 0.4273 MNKRKREEEEEEGIRMGTDIVWQTPANPPHPHDYIFRNGIRYVKPYYFEFIAHVKNRWAGKTIVDLFAQEFKGRPYEYYVSAVKCGRIQVDGERVSVSYIVKSSQKISHFVHRHEPPVMACEVPILQKELDVLTVCKPASVPIEGGLVRKKYIARVVGEFPKDELVVDANIDYNAREGRSTAEVRDSAKGKAASTKFTRISSNGAQSIVLCEPITGRTHQIRVHLKHSGHPIANDMLYISDETVDRSSKGSSADRSACTSATALTSSIEEKVVNDCEEKSNVGFSIDPMCTNCPNLAPKGYDTDEEGLWLHCIQYSGPDWTYECPYPDWAKLTQTT* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2930 336 Pfam RNA pseudouridylate synthase 148 227 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Ahy18g2930 336 ProSiteProfiles S4 RNA-binding domain profile. 61 123 - -
Ahy18g2930 336 PANTHER PSEUDOURIDINE SYNTHASE 18 143 - -
Ahy18g2930 336 Gene3D Pseudouridine synthase 136 274 - -
Ahy18g2930 336 SUPERFAMILY Pseudouridine synthase 145 331 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Ahy18g2930 336 PANTHER PSEUDOURIDINE SYNTHASE 143 332 - -
Ahy18g2930 336 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 18 143 - -
Ahy18g2930 336 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 143 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2930 Ahy-Chr18 134310164 134315852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2930 K15454 - gmx:100811500 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2930 18 134310164 134315852 Ahy18g2930 18 134310164 134315852 ECH