Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2920 ATGGCGGAGCATATTCCGGCGCCGGAGGCTCAGGTCAACGGCGGAGGAACGCTCCCTCCGGCGAACCCCTCCGAGCAACTAATCGCATCGAAGCGCCAGAGAAGGCCAAGTGTCCGATTGGGCGATATCGGAGGAGACCAACACTACGATACGCACCCTCGACGGAGCACCAAGCCATGGCGGATCCCCTTCGACGGCCACCACCAGCACCACCACATCCGCAAGGACAATCCAGGTAAACCCTCCAAAACTCGTCCTTTAACCAATTTGAGCTCCGGTGGCGGCGCCGCAGAGTTCGGCGAAACCCTAGAGGGCGAAGAGCGCGAAGGGAACATCGATAGCGTTGTGATTGGTAGCTGGAAGGTGAAGGATTCAAAGAAACGAGGAGCGAAGAGGGTTAGATCGAACTGGGTTTCGAGAATCGACGACGGCACCAGCGTCGGCGGTGGCGGTGGCTCTGGCGGTGGAGATGGAGATGGAGATGGAGAAGGAGAAGATAAGTATAGTGGCGGCGAGGATGTCGACGACGGGTATCGGGATTTCGATGTGGAGAATACAGAGAGCCCTTTGAAGGATCAAAGCCCTTTGAATTCAATGGAGAATCTGGATTTTCAGGGTAATAGGAGGAACATTAGGGTTAGGGTTTCAGAGGGTGCAAGGGAGCACCTTGATGGGGTTGAACTTTCTGGGCCTTCGGATAATAACGGTATTGTTAGGGAAAATAATAATAGGAATGGGAGAGGAAGGTATATTGGTGACGGTAATGGTGAAGATGGTGTTAGAGTTTGGCTCAATGGGTTAGGGTTAGGTAGGTATGCACCTGTGTTTGAAATTCATGAGGTGGATGATGAGGTTCTTCCATTGTTGACTCTTGAGGATCTCAAAGATATGGGGATCAATGCTGTTGGGTCAAGAAGGAAAATGTACTCTGCAATTCAGAAGCTTGGAAAAGGGTTCTCCTGA 963 0.5202 MAEHIPAPEAQVNGGGTLPPANPSEQLIASKRQRRPSVRLGDIGGDQHYDTHPRRSTKPWRIPFDGHHQHHHIRKDNPGKPSKTRPLTNLSSGGGAAEFGETLEGEEREGNIDSVVIGSWKVKDSKKRGAKRVRSNWVSRIDDGTSVGGGGGSGGGDGDGDGEGEDKYSGGEDVDDGYRDFDVENTESPLKDQSPLNSMENLDFQGNRRNIRVRVSEGAREHLDGVELSGPSDNNGIVRENNNRNGRGRYIGDGNGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGINAVGSRRKMYSAIQKLGKGFS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2920 320 SUPERFAMILY SAM/Pointed domain 257 315 IPR013761 -
Ahy18g2920 320 ProSiteProfiles SAM domain profile. 255 318 IPR001660 GO:0005515
Ahy18g2920 320 PANTHER - 6 320 - -
Ahy18g2920 320 MobiDBLite consensus disorder prediction 17 31 - -
Ahy18g2920 320 MobiDBLite consensus disorder prediction 1 107 - -
Ahy18g2920 320 CDD SAM_superfamily 260 314 - -
Ahy18g2920 320 SMART SAM_4 252 318 IPR001660 GO:0005515
Ahy18g2920 320 MobiDBLite consensus disorder prediction 123 201 - -
Ahy18g2920 320 MobiDBLite consensus disorder prediction 160 187 - -
Ahy18g2920 320 Gene3D - 255 315 IPR013761 -
Ahy18g2920 320 MobiDBLite consensus disorder prediction 35 72 - -
Ahy18g2920 320 Pfam SAM domain (Sterile alpha motif) 256 315 IPR001660 GO:0005515
Ahy18g2920 320 PANTHER SCP160 6 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2920 Ahy-Chr18 134132433 134135100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2920 - - aprc:113856178 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2920 18 134132433 134135100 Ahy18g2920 18 134132433 134135100 ECH