Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2910 ATGGGGAAAGATAACCACCCTTCCGCTATGGAAATCGACGATCCTAAATCCGCCAATTCCGATCAGATTGTTCCCAAGTTCTCCATCAATGTGCTGCAGCTCTTGAAATCGGCACAAATGCAGCACGGTTTGCGGCATGGAGATTACACTCGATATCGGAGGTATTGCACAGCTCGTTTGAGGAGGTTATATAAATCATTGAAGTTTACTCATGGTCGAGGCAAATATTCAAAAAGAAACATAACCGAGAGTACCGTCACTGACGTAAGGTTTCTTCATGTGCTTCTATATTCGGCAGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGACAGCTTCCAGATGGCCCAAATGCACGTCAACGTATCTATTTGATTGGCAGGCTACGGAAAGCTGTAAAATGGGCTACTTTGTTTTCAAAATTATGTGCCATCAAGGCAGATTCAAGAACATCTCTTGAAGCTGAGGCCTATTCATCCTATATGAAGGGTAATTTGTTGTTTGAACAAGATCAGAACTGGGATGTGGCTTTAATGAGCTTCAAAAGTGCCAGGGCTGTATATGAGGAATTAGGGAAATATGGAGATTTGGATAATCAAGTTTTGTGCCGTGAGCGAGTTGAGGAACTGGAACCTAGTATACGATATTGCCTTCATAAAGTTGGCCAGTCAAATTTACAGACCTCTGAACTTTTGAACATTGGTGACATGGAAGGTCCTGCATTAGACCTTTTTAAAGCAAAGTTGGAGGCTGTTATGGCAGAAGCAAGATCACAGCAGGCTGCTTCCATGACAGAGCTCAATTGGCTTGGCCATAGGTTTCCAGTATCAAATGCAAAAACAAGGGTTGCCATTTTAAAAGCTCAAGAGCTCGAGAAGGATTTACATGGTTCATCGGCAGACTCAACTCCATCAGACAAGAAACTTGTTATTTTTGACAAAATATTTTCTGCGTATCACGAAGCCAGAGGTTATATTCGAGCTGATTTGGCCACTGCAGGAAATGCAGAAAACGTGAAGGATGATTTGCATGGTCTTGACAAGGCTGTCAGTGCCATGTTGGGAGAAAGAACTATTGAGCGCAACCTTCTGTTGGTTAAGGTTGCAAAAAGTAAACTTGCTAGGCGTCGTGATGATAAAAATGATAAAGTCACCAAACCTGAAGAGCTTGTTCGTTTATATGATCTCTTGCTACAGAATACAGCCGATCTTTCCGATTTAGTCAGTTCAGGAAGGGATAAAAAGCCAGAAGAAGTGAGCTTTGCTGATGAGTGTGCATGCAAAACCTTGGCTTTTAGAGCAGAAAGGTGCTTTTATGTGGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCCTATGCTTTGTATCATCATGTTCGCAACTTAGCAGAGGATGCCTTAAGAAAGTTTAAATCGTTAAACGGTGACTATAAGAATATGATAAAAGACCTGGAGGAGTTGTGCAAGCAGTGCAGATCTAACAGTTGTATAGAACATGCCTTGGGGATCATGGAAGAGAATAAGGATCAAGAAAACATCTCTGAAAGGATCTCCAATATATCATTGACCGGGGCTGAGCGGTTGGAGAAATTCCTCCTTGATAAACTTGATGTTTATGAGTCTGCTGTTGGCGATTCCAATGTAAAATGTGCTCCCCGCATTGCATCCTTCCCCCCACCTTTCCAGGCCATTTCGCGCACTCCAATCGTGTTGGACCTGGCTTATAACAACATTGAATTCCCATCTCTTGAGAGTAGGATGAAAAAACAAAAGGGCGGCTTCATGAGTAGAATATGGGGATGA 1803 0.4276 MGKDNHPSAMEIDDPKSANSDQIVPKFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYSKRNITESTVTDVRFLHVLLYSAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAVKWATLFSKLCAIKADSRTSLEAEAYSSYMKGNLLFEQDQNWDVALMSFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKVGQSNLQTSELLNIGDMEGPALDLFKAKLEAVMAEARSQQAASMTELNWLGHRFPVSNAKTRVAILKAQELEKDLHGSSADSTPSDKKLVIFDKIFSAYHEARGYIRADLATAGNAENVKDDLHGLDKAVSAMLGERTIERNLLLVKVAKSKLARRRDDKNDKVTKPEELVRLYDLLLQNTADLSDLVSSGRDKKPEEVSFADECACKTLAFRAERCFYVAKSYSVAGKRAEAYALYHHVRNLAEDALRKFKSLNGDYKNMIKDLEELCKQCRSNSCIEHALGIMEENKDQENISERISNISLTGAERLEKFLLDKLDVYESAVGDSNVKCAPRIASFPPPFQAISRTPIVLDLAYNNIEFPSLESRMKKQKGGFMSRIWG* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2910 600 PIRSF SRP68 27 595 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Ahy18g2910 600 CDD SRP68-RBD 30 218 IPR034652 GO:0003723
Ahy18g2910 600 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 17 599 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Ahy18g2910 600 Gene3D - 26 222 IPR038253 GO:0003723
Ahy18g2910 600 Pfam RNA-binding signal recognition particle 68 44 578 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2910 Ahy-Chr18 133898587 133905961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2910 K03107 - gmx:100816486 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2910 18 133898587 133905961 Ahy18g2910 18 133898587 133905961 ECH