Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2889 ATGGCCCTGCATCTGCAGCCACATACAACCACTCTTTGCACTACAAAGTCAAAGTCAAAGTATCATCATGGCAACAATGGTAGCCTTGTTAGAAATGAAACAAAACTCTTCAACCCTTTTGCCTTGAACTCATCATCATTCTCTGGTTCACTCACCCTCTTGCTTAATCCTAAACAAATGCACAATCTTACTTCGACCACTCCGAGGATCTCCATGCGTGTCGCTTCCAAGCAAACCTATATCTGTCGTGATTGCGGCTATATTTATAATGAGAGAACCCCATTTGAGAAATTGCCTGATAAATATTTCTGCCCTGTTTGTGGTGCTCCAAAAAGAAGGTTTAGACCATATGCACCAGCTGTCACAAAAAATGCAAATGACACTGATGTTAGAAAGGCAAGGAAAGATGAGATCAAAAGAGAAGAAGCATTTGAGAAAGCAGTTCCTATTGCAGTTGCTGTGGGAATTGTAGTGCTTGCTGCTGGATTCTACTTCTATCTCAATAGCAGCATTGTTTAG 519 0.4123 MALHLQPHTTTLCTTKSKSKYHHGNNGSLVRNETKLFNPFALNSSSFSGSLTLLLNPKQMHNLTSTTPRISMRVASKQTYICRDCGYIYNERTPFEKLPDKYFCPVCGAPKRRFRPYAPAVTKNANDTDVRKARKDEIKREEAFEKAVPIAVAVGIVVLAAGFYFYLNSSIV* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2889 172 ProSiteProfiles Rubredoxin-like domain profile. 77 117 IPR024934 GO:0005506
Ahy18g2889 172 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 24 170 - -
Ahy18g2889 172 Gene3D - 78 117 - -
Ahy18g2889 172 CDD rubredoxin 80 117 IPR024935 GO:0005506
Ahy18g2889 172 Pfam Rubredoxin 80 114 IPR024935 GO:0005506
Ahy18g2889 172 SUPERFAMILY Rubredoxin-like 77 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2889 Ahy-Chr18 133609741 133610906 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2889 - - adu:107463474 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2889 18 133609741 133610906 Ahy18g2889 18 133609741 133610906 ECH
Ahy13g3039 13 122302047 122302463 Ahy18g2889 18 133609741 133610906 PCT
Ahy3g2706 3 119638544 119638960 Ahy18g2889 18 133609741 133610906 PCT