Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2817 ATGTGGCGCCGAAGCTACTCCCTCACGAAGCACCGTTTGGGGTTAGGGTTTCTACGAAGGTCCTTCTCATCAGAGCGAAGCGGAAAGAGGTTCGCGGCGCTCTGGGGGAACGGCGATTTCGGAAGATTAGGACTCGGCACTTTGGATTCTCAGTGGACTCCAGCTGTCTGCAACGCCTTCCAACACAAAACTCTCAAATCCATCGCTTGTGGCGGTGCTCACACACTCTTCCTAACAGACGATGGATTCGTGTATGCCACCGGTCTTAATGATTTCGGACAAGTTGGTATATCAGAGGGTAAACAGTACTTGGTGGAGCCAGTTCGGGTTTTGGTAGATGAGAAGAAGATTATGCACATTGCTGCTGGTTATAATCACTCGTGTGCAATAACAGCGGATGGAGAACTATATATGTGGGGAAAGAATACAAGTGGACAGCTTGGACTTGGAAAAAAAGCCCCAAACATAGTTCCTCTGCCAACTAAAGTGGAACATTTGGATGGAATCAGCATTAAAATGACAGCGCTGGGATCAGAGCACTCAATGGCTGTTAGTGATGGAGGAGAGGCCTTTAGTTGGGGGATGGGAGGTTCAGGTAGACTTGGTCATGGTCACGAGTCGGGCATTCTGGGATTATTTAAAAGTTACAGTGAGTATACTCCAAGGCTTATAAAGGATCTTGAGGGAATCAAGGTTAAATATATAGCTGCTGGGTTGCTAAATTCAGCTTGCATTGATGAAAATGGTTTTGTTTATATATTTGGAGAAAGAGGAATTGATAAATTGCGCTTGAAGGAGATGAGCAATGCAACAAAACCATCCTTAATTAATGAACTTCCATACTCACAGCAAGTTGCTTGTGGTGGCTATCATACCTGTGTCCTAACAAACTCTGGAGAGCTTTATACTTGGGGTTCGAATGAGAATGGCTGCCTCGGTATTGGTTCCCCTGATGCCATTCATGTACCAGAAAAGGTTCAAGGGCCATTCCTGAGGTCTTCTGTTAGTCAGGTTTCTTGTGGTTGGAAGCACACAGCGGCAATTTCTGAAGGAAGACTCTTCACATGGGGTTGGGGAGGTTCATATGGGACTTTCTCTGAAGTAGGACATTCTTCTGCTGGACAATTGGGCCAAGGAAGTGATGTGGACTACATAAATCCTGCTAGAGTTTGTTTTGGAGAAGAAGTGAAAGCATTACAAATTTCATGCGGGTTCAACCATACAGAAAAGCCAGAATGCTATGATCCATAA 1251 0.4524 MWRRSYSLTKHRLGLGFLRRSFSSERSGKRFAALWGNGDFGRLGLGTLDSQWTPAVCNAFQHKTLKSIACGGAHTLFLTDDGFVYATGLNDFGQVGISEGKQYLVEPVRVLVDEKKIMHIAAGYNHSCAITADGELYMWGKNTSGQLGLGKKAPNIVPLPTKVEHLDGISIKMTALGSEHSMAVSDGGEAFSWGMGGSGRLGHGHESGILGLFKSYSEYTPRLIKDLEGIKVKYIAAGLLNSACIDENGFVYIFGERGIDKLRLKEMSNATKPSLINELPYSQQVACGGYHTCVLTNSGELYTWGSNENGCLGIGSPDAIHVPEKVQGPFLRSSVSQVSCGWKHTAAISEGRLFTWGWGGSYGTFSEVGHSSAGQLGQGSDVDYINPARVCFGEEVKALQISCGFNHTEKPECYDP* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2817 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 249 298 IPR000408 -
Ahy18g2817 416 PANTHER OS11G0545800 PROTEIN 26 408 - -
Ahy18g2817 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 188 248 IPR000408 -
Ahy18g2817 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 351 408 IPR000408 -
Ahy18g2817 416 PRINTS Chromosome condensation regulator RCC1 signature 31 47 IPR000408 -
Ahy18g2817 416 PRINTS Chromosome condensation regulator RCC1 signature 190 204 IPR000408 -
Ahy18g2817 416 PRINTS Chromosome condensation regulator RCC1 signature 174 190 IPR000408 -
Ahy18g2817 416 PRINTS Chromosome condensation regulator RCC1 signature 65 78 IPR000408 -
Ahy18g2817 416 PRINTS Chromosome condensation regulator RCC1 signature 84 100 IPR000408 -
Ahy18g2817 416 PRINTS Chromosome condensation regulator RCC1 signature 346 367 IPR000408 -
Ahy18g2817 416 PRINTS Chromosome condensation regulator RCC1 signature 288 306 IPR000408 -
Ahy18g2817 416 PRINTS Chromosome condensation regulator RCC1 signature 134 150 IPR000408 -
Ahy18g2817 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 299 351 IPR000408 -
Ahy18g2817 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 134 187 IPR000408 -
Ahy18g2817 416 Gene3D - 208 408 IPR009091 -
Ahy18g2817 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 30 81 IPR000408 -
Ahy18g2817 416 SUPERFAMILY RCC1/BLIP-II 283 408 IPR009091 -
Ahy18g2817 416 Pfam Regulator of chromosome condensation (RCC1) repeat 35 78 IPR000408 -
Ahy18g2817 416 Pfam Regulator of chromosome condensation (RCC1) repeat 188 245 IPR000408 -
Ahy18g2817 416 Pfam Regulator of chromosome condensation (RCC1) repeat 133 184 IPR000408 -
Ahy18g2817 416 Pfam Regulator of chromosome condensation (RCC1) repeat 298 348 IPR000408 -
Ahy18g2817 416 Pfam Regulator of chromosome condensation (RCC1) repeat 81 130 IPR000408 -
Ahy18g2817 416 Gene3D - 28 207 IPR009091 -
Ahy18g2817 416 PANTHER UBIQUITIN-PROTEIN LIGASE E3A-RELATED 26 408 - -
Ahy18g2817 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 82 133 IPR000408 -
Ahy18g2817 416 SUPERFAMILY RCC1/BLIP-II 34 329 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2817 Ahy-Chr18 132445511 132451548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2817 - - ahf:112771572 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2817 18 132445511 132451548 Ahy18g2817 18 132445511 132451548 ECH
Ahy18g2817 18 132445511 132451548 Ahy8g2536 8 48206360 48212292 hybridization