Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy18g2811 | ATGGCAACCACTGCTTGTTTCATCATTGTTAGCAGAAATGATATTCCTATTTATGAAGCTGAAGTTGGAGTAGCTGCTAAAAGAGAGGATGCTGCTCAGCTGCATCAGTTTATCCTGCATGCTGCTCTCGATATTGTTCAGGACCTAGCGTGGACTACTAGCGCTATGTACTTGAAATCGGTAGACAGGTTTAATGATCTGGTGGTCTCAGTATATGTCACAGCTGGTCATACCCGTTTTATGTTGCTTCATGACTCTCGTAATGATGATGGCATTAAGAGCTTCTTTCAAGAGGTGCACGAACTTTACATAAAGACACTTCTTAATCCCCTGTACTTGCCTGGCTCCCGGATCACATCATCACATTTTGACACGAAAGTCCGAGCTCTTGCCCGAAAATATTTGTAG | 408 | 0.4314 | MATTACFIIVSRNDIPIYEAEVGVAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKSVDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKTLLNPLYLPGSRITSSHFDTKVRALARKYL* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy18g2811 | 135 | Pfam | Sedlin, N-terminal conserved region | 9 | 133 | IPR006722 | GO:0006888 | |
| Ahy18g2811 | 135 | Gene3D | - | 1 | 135 | - | - | |
| Ahy18g2811 | 135 | PANTHER | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 | 1 | 135 | IPR006722 | GO:0006888 | |
| Ahy18g2811 | 135 | SUPERFAMILY | SNARE-like | 1 | 135 | IPR011012 | - | |
| Ahy18g2811 | 135 | CDD | TRAPPC2_sedlin | 4 | 135 | - | - | |
| Ahy18g2811 | 135 | PANTHER | SNARE-LIKE SUPERFAMILY PROTEIN | 1 | 135 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy18g2811 | Ahy-Chr18 | 132385802 | 132388461 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy18g2811 | K20301 | - | gmx:100781378 | 266.929 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy18g2811 | 18 | 132385802 | 132388461 | Ahy8g2529 | 8 | 48131045 | 48133770 | hybridization |