Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2808 ATGGACCGAAGGAGTTGGCTATGGCGAAAGAAAAGTCCCGGCGAAACAGAGAGCTCTGGATCACAATCGCCTCATTCGGAACGATTCTCTGATGATCAGGTATATGGCACACAAATGAATCAATCAGCAGAAGTCATGTCTAAGGTTGAGCCAAATGAAGAAGAAATATCTGATGTGAAGATACTAACAGAAAGATTATCTTCTGCTCTCTTAGAGATTAGTACAAAAGAAGAATTGGTACAGCAACATGCCAAAGTTGCTGAAGAAGCTGTCTCAGGGTGGGAGAAAGCAGAAAATGAATTGTCAAGTTTGAAGAAACAACTTGATGATGCAAAGCAGAATAACTCGGTTCTTGAAGACCGAGTTAGTCACCTTGATGGAGCACTCAAGGAGTGTATGAGGCAGCTTAGACAAGCTAGAGAAGATCAAGAGAAGAAGAAGATCCATGAAGTTGCTCCGAACGGAGGGGAATCCGAGAAGTCTGAGATTGAGACTCAACTTCAGCAGAGGCTTGAGGATGTGGAGGAAGAAAATTCAACTCTTAAAGCCGAGCTTCATTCTCGACTCGAAGAACTAGAACTCAGAATAACTGAGAGGGATTTGAGTACACAAGCTGCTGAAGCAGCAAGCAAACAACACTTGGAGAGTATAAAGAAGGTAGCTAAGCTTGAAGCTGAGTGCCGAAGACTTAAGGCCATAGCTCGAAAAACCTTATCTGCCAATGATCAAAGGTCTATGACTGCTTCTTCAATCTATGTAGAGTCTTTAACAGATAGCACTTCAGATAGTGGAGAGAGACTAATGGCAGTTGAAACCGATATGCGCAAATTAGGCGCTTGGGAAACAAACGAACATGAGCCGAGCCATTCTGATTCGTGGGCTATAATTGCAGAAGTTGAGCAGTTAAAAAACTCTGCTGGAAAGAATCTTATGGTACCTTCAACTGAGATCAATTTGATGGATGATTTCCTTGAAATGGAAAGGCTAGCTGCAATGCCAGATACAGAAAGTGGAAGTGGTTTTATTGTTGTAGGACATTCGTCGAACCGGCCTAATGTTGAGCATGGTTCAATGAAATCTGGAGTGGAAGCATTGGTTCAAAAGAATGCTGAATTGGAAAAGAAGCTAGAGATGGTAGAATCACATAAGCTTGAGTTAGAGACAAGTTTAATTGAGTGCCAGAAGCAGCTCGTGGTGTCAGAGAATCGAATAAAGGAAGCAGAGTTGAAGGTAGAAGAGCTTCAAACTCAGTTAGACCTTGTGAAAAAATCACATGAAGAAGCATGTGAAGAACTAAAAGCAAGCCAAGAGAAGAATGAGATGGCTGAGTCAAAACTGAAAGTTGCTGAAACTGAGGTGCAAGAATTGATTTCAAAAATAAATTCATTGGATGAAGAGATTGAAAAGGAGAGAGCTTTATCTGCTGAGAATTTGGCCAAGTATGAAAAGTTGGTGGAAGAGATTGAAAAAGAGAGAGCTTTGTCTGCTGAGAATTTGTCCAAGTATGAGAAACTGGAGGAAGAGATTGAAAAAGAAAGAGCTTTGTCTGCTGAGAATTTGGCCAAGTATGAGAAATTGGAGGAAGAGATTGAAAAAGAAAGAGCTTTGTCTGCTGAGAATTTGTCCAAGTATGAGAAATTAGAGGAAGAGATTGAAAAGGAGAGAGCAATGTCTGAAAAAGAGAGAGCTTTGTCTATGGAGAATTTGGCTAAGTGTGAGAAGTTGGAGAAAGAGATATTGATTATGAAGTATGAAGATGGACTCAATCGAGACGCCGAGATACCGCACGGCGAAGGTGTTAGCAGTGAGATACAGTTAAGACAGGAGAAGGAGCTTGCATTGGCAGCTAGTAGATTTTCTGAGTGCAGGAAAACAATTGAATCACTTGGACAACAATTAAAGTCCCTTGCAACATTAGAAGATTTTCTTGTTGATTCAGATAAGCCTATGGACTTGGCTTGTGAAGCTGTTACACCAAATAATGGTGTTGAGAAGTTGAAATTACATAATAATAATAATAAAAACAACAAAATCAGTGATTTGAGTTTGGCCAAAAGAGATTCTGAACTATCAGTTTCAGTAATTAGTAGTCAATCTGTTAATAATGTGAAAAATCTCAGTAGTTTTGGTAGGTTCCACCCAAGAAGTAAGAGTGTCAGCAAAAGAGGAACTCATTAA 2178 0.4008 MDRRSWLWRKKSPGETESSGSQSPHSERFSDDQVYGTQMNQSAEVMSKVEPNEEEISDVKILTERLSSALLEISTKEELVQQHAKVAEEAVSGWEKAENELSSLKKQLDDAKQNNSVLEDRVSHLDGALKECMRQLRQAREDQEKKKIHEVAPNGGESEKSEIETQLQQRLEDVEEENSTLKAELHSRLEELELRITERDLSTQAAEAASKQHLESIKKVAKLEAECRRLKAIARKTLSANDQRSMTASSIYVESLTDSTSDSGERLMAVETDMRKLGAWETNEHEPSHSDSWAIIAEVEQLKNSAGKNLMVPSTEINLMDDFLEMERLAAMPDTESGSGFIVVGHSSNRPNVEHGSMKSGVEALVQKNAELEKKLEMVESHKLELETSLIECQKQLVVSENRIKEAELKVEELQTQLDLVKKSHEEACEELKASQEKNEMAESKLKVAETEVQELISKINSLDEEIEKERALSAENLAKYEKLVEEIEKERALSAENLSKYEKLEEEIEKERALSAENLAKYEKLEEEIEKERALSAENLSKYEKLEEEIEKERAMSEKERALSMENLAKCEKLEKEILIMKYEDGLNRDAEIPHGEGVSSEIQLRQEKELALAASRFSECRKTIESLGQQLKSLATLEDFLVDSDKPMDLACEAVTPNNGVEKLKLHNNNNKNNKISDLSLAKRDSELSVSVISSQSVNNVKNLSSFGRFHPRSKSVSKRGTH* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2808 725 Coils Coil 206 226 - -
Ahy18g2808 725 MobiDBLite consensus disorder prediction 12 33 - -
Ahy18g2808 725 Pfam Filament-like plant protein, long coiled-coil 165 238 IPR008587 -
Ahy18g2808 725 Pfam Filament-like plant protein, long coiled-coil 76 154 IPR008587 -
Ahy18g2808 725 Coils Coil 362 564 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 501 530 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 526 551 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 484 508 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 559 682 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 488 - -
Ahy18g2808 725 MobiDBLite consensus disorder prediction 1 33 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 484 508 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 488 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 559 682 - -
Ahy18g2808 725 Coils Coil 94 121 - -
Ahy18g2808 725 MobiDBLite consensus disorder prediction 138 179 - -
Ahy18g2808 725 Coils Coil 164 191 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 501 530 - -
Ahy18g2808 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 526 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2808 Ahy-Chr18 132344427 132348276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2808 - - aip:107613274 1303.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2808 18 132344427 132348276 Ahy18g2808 18 132344427 132348276 ECH
Ahy13g3018 13 121710891 121714865 Ahy18g2808 18 132344427 132348276 ECH
Ahy18g2808 18 132344427 132348276 Ahy8g2524 8 48092822 48096644 hybridization