Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2801 ATGATGAAAGGAACGAAGAAGTTATTATTACCAGGATTATTATTGTTGGTTTTCTTGTTATGTTGTTCAACTTGTTCAGCTTGGTTTGGTAGTAGTAGTAGTAGTAATAGTAATAAGCATAAAAGTATTAGTTCCAATTATGGAAATGGAAGAAGAAACTCTATTCCTCTTGATGAACCTTCCTCTTCCTCTTCCTCTTCCTCCTCGTCTTCATGGTTATCATCGTCGTTGCTTAATCAGTATCGAGCTAGCTCATCCGTCGTGTTTCGAGTTCACGGCAACGTTTATCCGGTTGGGTTCTATAATGTTACATTGAACATAGGGCACCCACCAAGGCCTTATTACCTTGACATTGATACAGGCAGCGACCTCACATGGCTTCAATGTGATGCCCCTTGTACTCATTGCACTCAGACGCCGCATCCGTTGTACCGGCCGAGCAATGACTTGGTGGCATGTAGGGATCCAATGTGTGCATCATTGCATCAGAATGAAGCATATGAATGTGAACAGCCACACCAATGTGACTATGAAGTTGAGTATGCAGATCATTACTCTTCCCTTGGTGTTCTTGTGAATGATGTGTACCTTCTGAACTTCACAAATGGAATCCAACTGAGAGTTAGAATGGCACTTGGATGTGGATATGATCAGCTATTTCAAGAGCACTCATACCATCCATTGGATGGAATGCTTGGTCTTGGAAGGGGAAGATCAAGCTTGGTTTCACAGCTTAATAGTCAGGGTTTGGTTAGAAATGTAGTTGGACACTGCTTGAGTTCACAAGGGGGAGGCTATATCTATTTTGGTCATGTTTTTGACTCTTCTAGACTCACTTGGACTCCTATGACATCCACACATTTCAAACATTACTCAGCTGGGCCAGCTGAACTCCTTTTGGGAGGAAAGAGAACTGGGATTGGAAATCTCCATGGTGTTTTTGACACTGGAAGTTCTTACACTTACTTCAACTCCATGGCTTACCAAGCAGCAATTTCTTGGTTAAATAAGGAGTTAGCTGGGAAGCCTTTAAAAGAAGCACATGATGATCACACACTCCCTCAATGTTGGCATGGTAGAAGGCCTTTCAGAAGCATACATGAAGTCAGAAAATACTTCAAGCCTATGGCGCTTTCTTTCGCCGGCGGCGGCCGAAGTAAAGCTCAGTTTGAAATCCCTCCTGAGGCATACCTCATAATATCAAACATGGGAAATGTTTGCTTGGGAATCTTAAATGGATCTGAAGTAGGGATGGGAGATCTAAACCTAATTGGAGACATATCCATGCAAGACAAAGTGATGGTATTTGACAATGAGAAAATGATGATTGGTTGGGCACCAGCAGATTGTGACAAAATCCCCAAATCAAGACATGCCAACATTTAA 1386 0.4221 MMKGTKKLLLPGLLLLVFLLCCSTCSAWFGSSSSSNSNKHKSISSNYGNGRRNSIPLDEPSSSSSSSSSSSWLSSSLLNQYRASSSVVFRVHGNVYPVGFYNVTLNIGHPPRPYYLDIDTGSDLTWLQCDAPCTHCTQTPHPLYRPSNDLVACRDPMCASLHQNEAYECEQPHQCDYEVEYADHYSSLGVLVNDVYLLNFTNGIQLRVRMALGCGYDQLFQEHSYHPLDGMLGLGRGRSSLVSQLNSQGLVRNVVGHCLSSQGGGYIYFGHVFDSSRLTWTPMTSTHFKHYSAGPAELLLGGKRTGIGNLHGVFDTGSSYTYFNSMAYQAAISWLNKELAGKPLKEAHDDHTLPQCWHGRRPFRSIHEVRKYFKPMALSFAGGGRSKAQFEIPPEAYLIISNMGNVCLGILNGSEVGMGDLNLIGDISMQDKVMVFDNEKMMIGWAPADCDKIPKSRHANI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2801 461 Gene3D Acid Proteases 271 454 IPR021109 -
Ahy18g2801 461 ProSiteProfiles Peptidase family A1 domain profile. 101 446 IPR033121 -
Ahy18g2801 461 Gene3D Acid Proteases 76 270 IPR021109 -
Ahy18g2801 461 Pfam Xylanase inhibitor N-terminal 101 271 IPR032861 -
Ahy18g2801 461 PRINTS Pepsin (A1) aspartic protease family signature 312 323 IPR001461 GO:0004190|GO:0006508
Ahy18g2801 461 PRINTS Pepsin (A1) aspartic protease family signature 422 437 IPR001461 GO:0004190|GO:0006508
Ahy18g2801 461 PRINTS Pepsin (A1) aspartic protease family signature 107 127 IPR001461 GO:0004190|GO:0006508
Ahy18g2801 461 SUPERFAMILY Acid proteases 93 453 IPR021109 -
Ahy18g2801 461 MobiDBLite consensus disorder prediction 30 69 - -
Ahy18g2801 461 PANTHER ASPARTYL PROTEASES 14 455 IPR001461 GO:0004190|GO:0006508
Ahy18g2801 461 Pfam Xylanase inhibitor C-terminal 312 446 IPR032799 -
Ahy18g2801 461 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 14 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2801 Ahy-Chr18 132285698 132289532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2801 75 456 Miscellaneous Gene Families AT1G44130 50.646 9.32e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2801 - - adu:107463231 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2801 18 132285698 132289532 Ahy8g2517 8 48034756 48038364 hybridization