Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2799 ATGGAAAAGTGGAAGGTTTTTGTGATGGTGATGATGGTGTCATTATTCACATTCACTGTTGGAGGAGAAGAAGATGGTGTTACATATGATGGAAGGTCTTTACTCATTCATGGCCAGAGGAAACTCCTCTTCTCTGGCTCTATTCATTATCCTCGAAGCACTCCGAAGATGTGGCCAGATTTGATAGGCAAAGCCAAAGAAGGAGGATTGGATGTTATTCAAACCTATGTGTTTTGGAATTTACACGAGCCTCAACCTGGACAGTATGATTTCAGTGGTAGATATGACTTGGTCAGATTCATAAAGGAAATCCAAGCTCAAGGCTTGTATGTTTGCCTCAGAATTGGACCTTTCATTGAGAGTGAATGGACATACGGGGGATTCCCATTTTGGTTACATGATGTGCCTGGAATTGTTTACCGAACGGACAATGAACCATTCAAGTTCTACATGCAAAATTTTACAACAAAAATAGTGAACATGATGAAAGCTGAGGGCTTATATGCTTCACAAGGAGGCCCAATTATATTGTCACAGATTGAAAACGAATATCAAAACGTGGAAAGGTCATTCGGTGTGGGAGGACCACAGTATGTTCAATGGGCTGCAAAAATGGCACTGAGCCTTGACACTGGTGTTCCATGGGTTATGTGCAAGCAAACTGATGCTCCTCATCCAGTGATCAATACATGTAATGGCATGAGATGTGGAGAAACCTTTCCAGGCCCAAACTCGCCCAACAAGCCCAAATTGTGGACCGAAGACTGGACTTCTTTTTATCAAGTGTATGGTGGGTTGCCATATATAAGATCTGCACAAGACATTGCATTTCACGTCACTCTTTTTATTGCAAGAAATGGAAGCTATGTCAACTATTATATGTACCATGGTGGAACTAACTTTGGGAGAACAGCCTCTGCTTATGTTATAACAGCATATTATGATCAAGCCCCTCTTGATGAATATGGTTTGTTGAGGCAACCTAAGTGGGGACATCTTAGGGAATTGCATGCTGCAATCAAGTCTTGCTCTTCAACTTTGTTGCAAGGAGTTCAAAGTAATTTCTCTTTAGGTAAATTGCAAGAGGGTTATGTTTTTGAAGAAGAAAATGAAGGATGTGTTGCATTCCTCATAAACAATGATGGAGTGAATAACACAAATGTCCAATTCCGCAACAAAACCTTTGAATTGCTACCTAAGTCAATTAGTATCTTACCAGATTGTCAAAATGTGACATTCAATACAGCAAATGTAAATACAACAAGCAACACAAGAATCTATTTTAACAGACAAAACTTCAGCTCAATAGATGATTGGGAGAAATTTGAAGATGTGATTCCAAATTTTGATGACACCACACTAAGATCAAACACTCTGCTTGAACAAATGAATACAACTAAAGACAAATCAGATTACCTTTGGTACACTACTAGGTTTGAATATAATTTATCTTGTAGCGAACCAACATTTGTTGTTGAGTCCAGGGCACATGTTGCTCATGCTTTTGTGAACACCACATACATAGGTGGAGCACATGGAAATCATGATGTGAATTCATTCAAATTAGAGCTCCCAGTTAGTGCAGTTACAGTGAATGAAGGGACAAACAACCTTTCTATCCTCAGTGTTATGGTTGGACTACCGGATTCAGGGGCATATCTGGAAAAAAGATTTGCTGGCTTAAGGAATGTGGAACTCCAATGTAGTAAACAAGAGTCACTTAGTTTGACCAATTCCACTTGGGGATATCAGGTTGGATTATTGGGAGAGAAATCACAAGTATATAGAGAACAAAATAGCAGTGATACTGAATGGACTCCACTGGAAAATATTACCACTCAGATGCTTGTTTGGTATAAGAGTACATTTGAAACACCAGAGGGTGATGACCCTGTTGCATTGGACCTAAGCTCAATGGGTAAAGGTGAAGTTTGGGTTAATGGAGAGAGCATTGGTCGCTATTGGATCTTATTCCATGATTCCAAAGGCAACCCTTCACAATCAATGTATCATGTGCCACGGTCTTTCCTTAAAGACAAGTCTGAAAATGTGTTGGTTTTGGTTGATGAAGGTGGTGGGAATCCTCTTGCCATAACCCTAAACACTGTTGTTGTCGCTAATTTTCATCAAACCAAATCTAACTTACTCTCATTTCCATCCTTTGCTTAA 2169 0.396 MEKWKVFVMVMMVSLFTFTVGGEEDGVTYDGRSLLIHGQRKLLFSGSIHYPRSTPKMWPDLIGKAKEGGLDVIQTYVFWNLHEPQPGQYDFSGRYDLVRFIKEIQAQGLYVCLRIGPFIESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMMKAEGLYASQGGPIILSQIENEYQNVERSFGVGGPQYVQWAAKMALSLDTGVPWVMCKQTDAPHPVINTCNGMRCGETFPGPNSPNKPKLWTEDWTSFYQVYGGLPYIRSAQDIAFHVTLFIARNGSYVNYYMYHGGTNFGRTASAYVITAYYDQAPLDEYGLLRQPKWGHLRELHAAIKSCSSTLLQGVQSNFSLGKLQEGYVFEEENEGCVAFLINNDGVNNTNVQFRNKTFELLPKSISILPDCQNVTFNTANVNTTSNTRIYFNRQNFSSIDDWEKFEDVIPNFDDTTLRSNTLLEQMNTTKDKSDYLWYTTRFEYNLSCSEPTFVVESRAHVAHAFVNTTYIGGAHGNHDVNSFKLELPVSAVTVNEGTNNLSILSVMVGLPDSGAYLEKRFAGLRNVELQCSKQESLSLTNSTWGYQVGLLGEKSQVYREQNSSDTEWTPLENITTQMLVWYKSTFETPEGDDPVALDLSSMGKGEVWVNGESIGRYWILFHDSKGNPSQSMYHVPRSFLKDKSENVLVLVDEGGGNPLAITLNTVVVANFHQTKSNLLSFPSFA* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2799 722 SUPERFAMILY Galactose-binding domain-like 580 716 IPR008979 -
Ahy18g2799 722 Gene3D - 547 714 - -
Ahy18g2799 722 Pfam Beta-galactosidase jelly roll domain 612 688 IPR025300 -
Ahy18g2799 722 SUPERFAMILY Galactose-binding domain-like 402 567 IPR008979 -
Ahy18g2799 722 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 614 628 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 170 185 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 641 657 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Ahy18g2799 722 Gene3D Glycosidases 24 344 - -
Ahy18g2799 722 Pfam Glycosyl hydrolases family 35 33 339 IPR031330 -
Ahy18g2799 722 PANTHER BETA-GALACTOSIDASE RELATED 23 714 IPR001944 GO:0004553|GO:0005975
Ahy18g2799 722 PANTHER BETA-GALACTOSIDASE 6 23 714 - -
Ahy18g2799 722 SUPERFAMILY (Trans)glycosidases 27 343 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2799 Ahy-Chr18 132247234 132260116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2799 7 706 Glycoside Hydrolase AT5G63800 63.210 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2799 - - gmx:100818637 1209.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2799 18 132247234 132260116 Ahy18g2799 18 132247234 132260116 ECH
Ahy13g3026 13 121873608 121879059 Ahy18g2799 18 132247234 132260116 ECH
Ahy18g2799 18 132247234 132260116 Ahy8g2515 8 48004425 48015357 hybridization