Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2747 ATGAAGTTCAAGGTAGCGAATGCATCGGAATACCTGGTAATAACAGGTGCAGGGATCAAAGACGTGAAGCTTGCGAAGAAAGCATGGGTATTGCCATGGCAATCATGCACCACCTTGGACCTTTCTCCGGTAAACTACACGTTCGAGCTCCAAGCCATGAGCGCCGAGAAGCTCCCTTTCAAGCTTCCTTCGGTGTTCACAATTGGTCCACGTGTTGACGATCACGAGTGTCTCCTAAAGTACGCCAAGCTCCTCTCGTCCCATGATAAGCTCTCCAACGACGTTAATGATCTGGTCCAAGGAGTCATTGAGGGCGAGACGCGTGTTCTCGCAGCTTCTATGACTATGGATCAGATCTTCAGGGGAACCAAGGAGTTCAAGCAAGGTGTGTTCGAGAAGGTTCAGCTGGAACTGAATCAGTTTGGGCTGCTGATCTACAATGCCAATGTGAAGCAACTGGTGGACGTGCCGGGACATGAGTACTTCTCTTACTTGGGCAAGAAGACTCAGATGGAGGCCGCAAATCAGGCCAAGGTTGATGTTGCTGAGGCCAAGAAGAAGGGTGAGGTTGGTGCCAAGCTCAGGGAAGGCGAGACGCTCCAGAATGCGGCCAAGATCGATGCTGAGACGAAGATCATTGCCACTCAGAAGAAAGGCGAGGGCGATAAGGAGGAGATCAACGTGAGGACATCAGTGAAGGTGTTCGAGAACTTGAAGGAAGCAGAGGTGGCAGAGGCAAATGCAGAGCTGGCAAGAAAGAAGGCGGAGTGGTCGAAGGTGGCTAAGTTGGCGGAAATGGAGACTACAAAGGCAGTGTCTTTGAGGGAGGCAGAGCTGCAGGGCGAGGTTGAGAGGATGAATGCTAAGGCGAAGACTGAGAAACTTAGAGCTGATTACCTTACCAAGGCAAGCGTTGAGTATGAGACCAAGGCACAAGAGGCCAACTGGGAACTATACAAGAAACAAAAAGAAGCAGAAGCAGTTCTTTTCCAGAAGGAGAAAGAAGCTGAAGCACAAAAGAAATTAGCAGAGGCACAGTTTTTCGCTCGCCAACAAACCGCCGATGCACAGCTATACGCGAAGAAGAAGGAGGCAGAGGGGCTTATGGCATTAGGGAAAGCCCAAGGTGCATATCTAAAGACACTCCATGAAGCAGTTGGAGGAAACTATGCAGCTCTAAGGGACTACTTGATGATAGAGGGTGGAATGTATCAAGAGATTGCTAAGATTAATGGCGACGCAGTACGTGGACTCAAGCCGAATATCAGCATTTGGACTAATGGCAATGACGAAGGCAGTGATGGCGGTAGTGCTTTGAAGGAGGTTGCCGGTCTGTATAAGATGCTGCCACCTTTGTTTAAGACAGTTGAAGAACAAACTGGTATGCTGCCTCCAGCTTGGATGGGAACCTTGACTCAAAAGAATGTGGATCAAACTTCTCTAAAGTGA 1449 0.4934 MKFKVANASEYLVITGAGIKDVKLAKKAWVLPWQSCTTLDLSPVNYTFELQAMSAEKLPFKLPSVFTIGPRVDDHECLLKYAKLLSSHDKLSNDVNDLVQGVIEGETRVLAASMTMDQIFRGTKEFKQGVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGKKTQMEAANQAKVDVAEAKKKGEVGAKLREGETLQNAAKIDAETKIIATQKKGEGDKEEINVRTSVKVFENLKEAEVAEANAELARKKAEWSKVAKLAEMETTKAVSLREAELQGEVERMNAKAKTEKLRADYLTKASVEYETKAQEANWELYKKQKEAEAVLFQKEKEAEAQKKLAEAQFFARQQTADAQLYAKKKEAEGLMALGKAQGAYLKTLHEAVGGNYAALRDYLMIEGGMYQEIAKINGDAVRGLKPNISIWTNGNDEGSDGGSALKEVAGLYKMLPPLFKTVEEQTGMLPPAWMGTLTQKNVDQTSLK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2747 482 Coils Coil 236 256 - -
Ahy18g2747 482 PANTHER FLOTILLIN-LIKE PROTEIN 6 ISOFORM X1 1 474 - -
Ahy18g2747 482 Pfam SPFH domain / Band 7 family 7 185 IPR001107 -
Ahy18g2747 482 PANTHER FLOTILLIN-RELATED 1 474 IPR027705 -
Ahy18g2747 482 CDD SPFH_flotillin 29 176 - -
Ahy18g2747 482 Gene3D Band 7 domain 38 156 IPR036013 -
Ahy18g2747 482 SUPERFAMILY Band 7/SPFH domain 32 173 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2747 Ahy-Chr18 131039048 131041543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2747 K07192 - mnt:21391890 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2747 18 131039048 131041543 Ahy18g2747 18 131039048 131041543 ECH
Ahy18g2747 18 131039048 131041543 Ahy8g2485 8 47616289 47621117 hybridization