Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2682 ATGGATTCTGAAGGAAGTGAAAAGGGGACTGTGGTTACTCAGGTTAGCATTGGTGGATTTGACCGTGAGGTCAGAGCAAATGATCTTGTGGTATTCTTGGAAGAGAAAATTGGAATGGTAGATAGGTGTCGCTTGAAAACATCTTGGACCCCTCCAGAGTCATATCCAGATTTCAGCATCATTGATACTACACGGGTTAAAAAAACTGATGCCTATCAGAAGGTGGAGCCCCATGCCTTTGTGCATTTCGCAATGTCGGAATATGTAGCTGAGGCTCTTAGTGCTGCAGGTCGAGGTGATCTAGTTTTGAATAACTCGCCGTTGAAAGTTAGTTGTGGTCCTGAAAATCCACACTTCTTAAGGCAGAGGAGGAGAAAGACAACTCCTTTTAAGATGTGTGATGTACTTGTTGAAATTGGTACTTTAGTTAAGCCTGAGGAATTTGTAGTCGCTTGGAGAGGACCTAACAAAGGGGTAAACTTTCTAGTGGATCCTTTTGATAGCATGTGCAAAGTTTGTTTCAATAAGGACGTTGTATTTGCATTCAAAGGAAAAGAAACAAAAGCAGTCATAAAGTGTGATTTTCAGGTGGGATTCTTGGTGAGAGACATAAATGAGATAAAGCAATATAAGGATATGTCATCTTTTGTTGTTTTATTGCACCTTGCTTCAGCTCCTTGGGTTTGGTATAGAACTGCAGATGATGACATTGTAGAATCTCCAATTGATTTGCTTGATGACGACGATCCGTGGGCTAGGACCACTGATTTTACACCAAGTGGGGCCATTGGTCGCTGCAATTTTTATAGAATTTCAATACCACCACGCCATGGTGCAAAATTGGTTAAGGCCATGCATTACTTGAGAGCTCAAAGAGTGCAAGATATTTCACTTAGGCGACCACCTAGGGTACTGGATGAACTAGATTTTGGTGTGTCCATGTCAGATCCTTTCTTCTGCATTCATTCACAGAAAGGTGTTGCTTTTGATGTTATATTCTTGGTTAATGCTGTCTTGCACAAAGGTATAATCAATCAACACAGTTTGTCAGACGAGTTTTTTGAATTGCTGAGAAATCAGCCTAAGGAGGTCAATGTGGCTGCCCTGAAACACTTATGTTCATACAAGCGTCCAGTGTTTGATGCAGCTAAGAGGCTGAAACAAGTCCAAGAATGGTTGCTCAGAAATCCAAAACTTTTTCAGAACTCGAAACAGTTAGATGATGTTGTTGAGGTTAGAAGACTGGTCATCACTCCAACTAAAGCCTACTGTATACCACCAGAGGTTGAACTGTCCAACAGGGTTCTTAGAAACTACAAAGAACTTTCAGATCGTTTCTTAAGGGTCACCTTTATGGATGAAGGCATGCAAACAATCAATGCGAATGCTCTTAACTATTATGTTGCTCCCATAGTGAAGGAAATCACTTCAAACTCCTTTCCGCAGAAGACACTAATATATAGGAGGGTGAAGAATATCTTGGAAGAGGGGTTTCATTTATGTGGCCGAAAGTATTCGTTTTTGGCCTTCTCTTCCAATCAACTGCGGGATCGTTCTGCTTGGTTTTTTGCTAATGCAAGCAACGAAACTTGTGATACCATAAGAAATTGGATGGGAAAGTTCAAAATACACAATATTGCAAAATGTGCTGCTCGGATGGGACAGTGTTTTTCATCCACTTATGCAACAGTTCAAGTTGCAGATGCTGAGGTTAACTATCGTTTGCCAGATATTGTAAGGAATAACTATGTTTTCTCTGATGGCATTGGTATTATTACTACTGATCTGGCAGGGGAAGTTGCTGAAAAGTTGAAATTGGACAGTGTGCCCTCTGCATATCAGATCAGATTTGCTGGTTTTAAAGGGGTAGTAGCCTCTTGGCCTGCCAAAAGGGATGAGCATCGGCTCTCTTTAAGGCCTAGTATGGACAAGTTTTCTTCTAATCATAAGACCTTGGAGATTTGTGCTTGGACTAGGTTTCAGCCTGGATTTCTGAATAGGCAGATTATAACATTGCTTTCAGCATTGGATGTATCAGATGAAATATTTTGGCAAATGCAGGAGGCAATGATTTCAAGGTTAAATGAAATGCTTGTGGATGCCAATGTGGCATTTGAAGTTCTTACGAAATCCTGTGCTGAGCATGGAAATGCTGCAGCAATAATGTTAAGTTGTGGTTTCAACCCCCAAAATGAACCTCACCTTAGAGGTATGTTGACTTCCACACGTGCTGCACAGTTATGGGGACTCAGAGAAAAGTCTAGGATTTTTGTATCTTCTGGCCGGTGGTTGATGGGTGTATTAGATGAGTTGGCTGTGCTTGAACAAGGGCAATGCTTTGTTCAAGTGTCTACTCCCTCACTTGAGAATTGTTTCTCAAAGCATGGGTCAAGATTTTCAGAGACAAAGAACCTTCACATAGTGAAAGGTTTGGTGGTTATAGCCAAAAATCCTTGTCTTCACCCAGGTGATGTAAGAGTTTTGGAGGCAGTTGATGCTCCTGAATTGCATCATTTACATGATTGTCTTGTGTTCCCTCAAAAAGGGGACAGACCTCATACAAATGAGGCTTCTGGAAGTGATCTTGATGGGGATCTTTATTTTGCCACATGGGATGAAAATCTTATTCCACCTAGTAAGAGTAGCTGGATACCTATGGATTATACTGCACAAGAAAGCCAACGTACCAACCGTCAAGTCACTACTCGGGACATTGTAGATTTTTTTGTCAGAAACATGGTCAATGAGCATTTGGGTACCATATGCAATGCACATGTTGTACATGCCGATTGCAGCGAGTATGGTGCCTTGGACGAGAAATGCATAAAACTGGCTGAGTTAGCAGCAACTGCGGTTGATTTTCCAAAGACTGGGAAGATTGTTGCCATGCCACCTCAATTGAAACCAAAATTGTACCCTGATTTTATGGGCAAGGAGCCGCACCAATCCTATAAATCCACAAAAATCCTTGGCAGACTTTACAGGAGTATCAAAGATGCCTATGATAAAGAAATTGATGCACCTGATTTGAACTATCCAACAGATGACATACCTTACGATACAGATCTTGAGGTTCCAGGATCTGCTGATTTTATTGCTGATGCATGGGAAAAGAAGTGCTCTTATGATGGTCAATTGAGTGGACTTCTTGGTCAATATAAAGTGAAAAGAGAAGAGGAGGTTGTCACTGGGCAGATCTGGTCAATGCCAAAATACAACAGTAGGAAGCAAGGGGAGCTGAAGGAGAGACTCAAGCACTCATATAGTGCCCTGAAAAAAGAATTCCGGAACATGTTCGAGAAATTGAATTTGAATCCAGATGCAGGAGAATTAAGTGACGAAGAAAAGAATCTGTTGTATGAAAAGAAAGCTTCGGCGTGGTATCAGGTGACATATCATCCTGAGTGGGTAAAGAAGTCCCTTGAACTGCAATTCAAGTCCCGAGAGAGCCAGGAGCCAGGTAGTTTGGGGAATGTGGTGATGCTGAGTTTCCCCTGGATTGCTGTTGATTACCTTGCTCGCATGAAGATAAGGCATCGAAACTCTGGAAACTTCGACTCCACTAGGCCAGTTGATTCCCTGGCAAAGTACCTATCCGAAAGGTTATAG 3609 0.4176 MDSEGSEKGTVVTQVSIGGFDREVRANDLVVFLEEKIGMVDRCRLKTSWTPPESYPDFSIIDTTRVKKTDAYQKVEPHAFVHFAMSEYVAEALSAAGRGDLVLNNSPLKVSCGPENPHFLRQRRRKTTPFKMCDVLVEIGTLVKPEEFVVAWRGPNKGVNFLVDPFDSMCKVCFNKDVVFAFKGKETKAVIKCDFQVGFLVRDINEIKQYKDMSSFVVLLHLASAPWVWYRTADDDIVESPIDLLDDDDPWARTTDFTPSGAIGRCNFYRISIPPRHGAKLVKAMHYLRAQRVQDISLRRPPRVLDELDFGVSMSDPFFCIHSQKGVAFDVIFLVNAVLHKGIINQHSLSDEFFELLRNQPKEVNVAALKHLCSYKRPVFDAAKRLKQVQEWLLRNPKLFQNSKQLDDVVEVRRLVITPTKAYCIPPEVELSNRVLRNYKELSDRFLRVTFMDEGMQTINANALNYYVAPIVKEITSNSFPQKTLIYRRVKNILEEGFHLCGRKYSFLAFSSNQLRDRSAWFFANASNETCDTIRNWMGKFKIHNIAKCAARMGQCFSSTYATVQVADAEVNYRLPDIVRNNYVFSDGIGIITTDLAGEVAEKLKLDSVPSAYQIRFAGFKGVVASWPAKRDEHRLSLRPSMDKFSSNHKTLEICAWTRFQPGFLNRQIITLLSALDVSDEIFWQMQEAMISRLNEMLVDANVAFEVLTKSCAEHGNAAAIMLSCGFNPQNEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDELAVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLHIVKGLVVIAKNPCLHPGDVRVLEAVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFATWDENLIPPSKSSWIPMDYTAQESQRTNRQVTTRDIVDFFVRNMVNEHLGTICNAHVVHADCSEYGALDEKCIKLAELAATAVDFPKTGKIVAMPPQLKPKLYPDFMGKEPHQSYKSTKILGRLYRSIKDAYDKEIDAPDLNYPTDDIPYDTDLEVPGSADFIADAWEKKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRNMFEKLNLNPDAGELSDEEKNLLYEKKASAWYQVTYHPEWVKKSLELQFKSRESQEPGSLGNVVMLSFPWIAVDYLARMKIRHRNSGNFDSTRPVDSLAKYLSERL* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2682 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 8 1201 IPR007855 GO:0003968
Ahy18g2682 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 8 1201 - -
Ahy18g2682 1202 Pfam RNA dependent RNA polymerase 417 997 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2682 Ahy-Chr18 129921843 129929727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2682 K11699 - gmx:100795178 2007.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2682 18 129921843 129929727 Ahy8g2432 8 47002801 47010599 hybridization