LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy18g2632	ATGGACAACGGAGATATTCCTGAAAATGCCAACGAGCATTGTCCAGGTCCTCAGTCAGAATCTGCAGGAAAATCCGATGCATGTGAAGGATGCCCCAATCAACAAATTTGTGCCACCGCTCCCAAAGGACCTGACCCTGACCTAGTTGCTATCGCAGAAAGAATGGCTACTGTGAAGCATAAAATATTGGTCTTGTCAGGAAAAGGAGGAGTAGGCAAGAGCACATTTTCCGCCCAGCTGGCATTTGCTTTAGCAGCAATGGATTTTCAAGTGGGTCTTCTTGACATTGACATTTGTGGTCCAAGCATCCCTAAGATGCTCGGTCTAGAAGGTCAAGAGATACATCAGAGCAACCTCGGGTGGTCTCCTGTCTATGTGGAGTCCAACCTTGGTGTCATGTCAATTGGATTCATGCTTCCAAATCCTGATGATGCTGTTATATGGAGAGGCCCCCGCAAAAATGGGCTTATTAAGCAGTTTCTGAAAGACGTCTATTGGGGTGAGCTTGATTTCCTTATTGTTGATGCTCCTCCTGGTACCTCAGATGAGCACATTTCAATTGTTCAATGCCTTGATGCAACTGGAGTAGATGGTGCAATTATAGTCACCACTCCTCAGCAAGTCTCTCTTATTGATGTGAGAAAAGAGGTGAGTTTCTGCAAGAAAGTTGGAGTGAAAGTTCTTGGGGTAGTAGAGAATATGAGTGGCCTGTGCCAGCCCCTAATGGATTTTAAGTTCATGAAGTTGACGGATAATGGTGAGCAGAAAGATGTTACGGAATGGATATTGGGATACATGAGAGAAAAAGCACCAGAAATGCTGAATTTGATGGCATGCAGTGAAGTTTTCGATAGTAGTGGTGGTGGCGCAATGAAAATGTGCAATCAAATGGGGGTGCCTTTTCTCGGTAGGGTTCCACTAGATCCGCAACTTTGTAAGGCAGCTGAAGAAGGCAGGTCCTGCTTTGCTGATAAAGATTGTGTCGTGAGCGCTCCTGCATTAAAGAAGATTATAGAGAAGTTGATAGAAGCAAATGGGTTGTCAATGGCAGCTAGTAATGGAGTGTAG	1068	0.4494	MDNGDIPENANEHCPGPQSESAGKSDACEGCPNQQICATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAMDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHISIVQCLDATGVDGAIIVTTPQQVSLIDVRKEVSFCKKVGVKVLGVVENMSGLCQPLMDFKFMKLTDNGEQKDVTEWILGYMREKAPEMLNLMACSEVFDSSGGGAMKMCNQMGVPFLGRVPLDPQLCKAAEEGRSCFADKDCVVSAPALKKIIEKLIEANGLSMAASNGV*	356

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy18g2632	355	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	45	322	IPR027417	-
	Ahy18g2632	355	ProSitePatterns	Mrp family signature.	166	182	IPR000808	GO:0005524
	Ahy18g2632	355	MobiDBLite	consensus disorder prediction	1	27	-	-
	Ahy18g2632	355	Hamap	Cytosolic Fe-S cluster assembly factor NUBP1 [NUBP1].	7	346	IPR028601	GO:0016226\|GO:0051536\|GO:0051539
	Ahy18g2632	355	Pfam	NUBPL iron-transfer P-loop NTPase	278	341	IPR033756	-
	Ahy18g2632	355	Pfam	NUBPL iron-transfer P-loop NTPase	58	244	IPR033756	-
	Ahy18g2632	355	Hamap	Iron-sulfur cluster carrier protein.	53	342	IPR019591	GO:0005524\|GO:0016226\|GO:0051536\|GO:0140663
	Ahy18g2632	355	Gene3D	-	54	352	IPR027417	-
	Ahy18g2632	355	CDD	Mrp_NBP35	60	313	-	-
	Ahy18g2632	355	PANTHER	CYTOSOLIC FE-S CLUSTER ASSEMBLY FACTOR NBP35	1	343	-	-
	Ahy18g2632	355	PANTHER	NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED	1	343	IPR019591	GO:0005524\|GO:0016226\|GO:0051536\|GO:0140663

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy18g2632	Ahy-Chr18	128963295	128967889	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy18g2632	-		-	gmx:100820246	670.618

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy18g2632	18	128963295	128967889	Ahy18g2632	18	128963295	128967889	ECH