LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy18g2606	ATGTGTAGTACTAACACTTCAGTACTTGATTGCTTCAAACCTGATGCAAAATTCAACATGCGTCATCGAAACACTGCAAATTATCATCCTAGTATTTGGAAGGATTATTTCCTTCAATATGCTTCACAATCCATGGAATTTGATGATGAAACGAAGGCACAAATTGAAAATCTGAAGAAAGAAGTTGTCAAAATGCTTATTGACGCCTCAAAGGCTATTGAAGAAATAGTTAACTTGATTGATTTAATATGTCATTTGGGGATTCATTATCACTTTGAAAGCGAGATTGATGAAGTGCTGCAACAAATTCACAAGAATTATACCCAAAATGGAGAAATAATAATTGTTGATGATAACCTTCGCTTACTTGCTTTGCTTTTTAGGTTATTAAGGCAACAAGGATATCACGTTTCACCAAATGTGTTCAACAAATACAAGGATGAGAATGGAAATTTCAGTGAAAAACTTGTGAAGGATGTGGAGGGATTGGTAGAGTTGTATGAAGCATGTCATCTCAGAATTCATGGAGAAGAAATATTAGATGAAGCTTATGCATTCGCTTCCACTAAACTTAAATCCATTGCGACCCAATTGAAGCCTTCACTTGCAGCACAAGTCAATTATAGTTTAAAGCAATCTTTACACCGAGGTTTGCCGAGATTGGAGGCACGCCGTTTTATTTCAATATATGAAGAAGATCCAACCCATAATCAAATTCTACTCACTCTTGCAAAATTAGACTTTAATTTCCTACAAAACTTGCATCGAAAAGAAGTTGGCAACATTTGCGAGTGGTGGAAAGAGGTTGATGTTGCTGCAAAACTGCCATTTACTCGAGATAGAATTGTGGAATGTTGTAACTGGATTTTGGCAATTTATTTTGAGCCCCAATATTCTCAAATTAGGAAAATACTGACAAAACTGATCGCTTTTATGTCAATTGTTGATGATACATATGATTTGTATGGAACCATGGATGAACTGGAACTTTTCACCGAGGCAATTCAAAGGTGGGATATTAGTTGCATAAATGATCTTCCAGAATACATGAAATTAATATATGAGTCTCTCTTCAAGATTTATGAAGAAGCAGAACGAGAGCTTGAAAAGCAAGGAAGAGCATATTGCATTAAATATGTCATAAAAGAACTTCAAAAGACAATCCAAGCCTACATGACTGAGGTCAAATGGTTGAATAACAAGTATATACCAACAATGGCAGAGTACATCCAAACATCAGCAATCTCATCTGGTTATCCGTTGCTCATAGCAATTTCTTATGTTGGCATGGGAGATATGGCCACAAAAGACATCTTTAAATGGGTAACAAATGAACCCAAAATTGTTACAGCTTCTGCAACTATGTGCAGGATCATGGATGACATTGTCTCTAATGAGTTTGAACAAAAAAGAGAACATGTTGCCTCAATAATAGAATGCTATATGAGAGATTATGGTGTATCTAAAGAAGAAGCCATTCAAGAATTGCAAAAGGGAGTTACAGATGCTTGGAAGGATATAAATGAGGAATGCCTCAAGCCAACAGAAGTTCCAAGGCCGTTTCTAATGAATATTCTCAACATGTCACGATTTTTGGATGTGATGTACAAAGATGAAGATTGCTACACTCATGCTGAAGGAAAAATGAAGAAATGCATTCAAGCTTTGCTTGTTGATCCGGTGCCAATAACATGA	1695	0.3593	MCSTNTSVLDCFKPDAKFNMRHRNTANYHPSIWKDYFLQYASQSMEFDDETKAQIENLKKEVVKMLIDASKAIEEIVNLIDLICHLGIHYHFESEIDEVLQQIHKNYTQNGEIIIVDDNLRLLALLFRLLRQQGYHVSPNVFNKYKDENGNFSEKLVKDVEGLVELYEACHLRIHGEEILDEAYAFASTKLKSIATQLKPSLAAQVNYSLKQSLHRGLPRLEARRFISIYEEDPTHNQILLTLAKLDFNFLQNLHRKEVGNICEWWKEVDVAAKLPFTRDRIVECCNWILAIYFEPQYSQIRKILTKLIAFMSIVDDTYDLYGTMDELELFTEAIQRWDISCINDLPEYMKLIYESLFKIYEEAERELEKQGRAYCIKYVIKELQKTIQAYMTEVKWLNNKYIPTMAEYIQTSAISSGYPLLIAISYVGMGDMATKDIFKWVTNEPKIVTASATMCRIMDDIVSNEFEQKREHVASIIECYMRDYGVSKEEAIQELQKGVTDAWKDINEECLKPTEVPRPFLMNILNMSRFLDVMYKDEDCYTHAEGKMKKCIQALLVDPVPIT*	565

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy18g2606	564	PANTHER	TERPENE SYNTHASE 2-RELATED	20	545	-	-
	Ahy18g2606	564	Gene3D	Farnesyl Diphosphate Synthase	30	551	IPR008949	-
	Ahy18g2606	564	SFLD	Isoprenoid Synthase Type I	236	562	-	-
	Ahy18g2606	564	Pfam	Terpene synthase family, metal binding domain	241	506	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Ahy18g2606	564	PANTHER	OS04G0344100 PROTEIN-RELATED	20	545	-	-
	Ahy18g2606	564	SUPERFAMILY	Terpenoid synthases	236	561	IPR008949	-
	Ahy18g2606	564	Coils	Coil	354	374	-	-
	Ahy18g2606	564	Gene3D	-	71	236	IPR036965	GO:0010333\|GO:0016829
	Ahy18g2606	564	Coils	Coil	55	75	-	-
	Ahy18g2606	564	Coils	Coil	381	401	-	-
	Ahy18g2606	564	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	29	235	IPR008930	-
	Ahy18g2606	564	Pfam	Terpene synthase, N-terminal domain	32	210	IPR001906	GO:0010333\|GO:0016829
	Ahy18g2606	564	SFLD	Terpene Cyclase Like 1 C Terminal Domain	236	562	IPR034741	-
	Ahy18g2606	564	CDD	Terpene_cyclase_plant_C1	23	560	IPR044814	GO:0010333\|GO:0016102

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy18g2606	Ahy-Chr18	128436890	128441840	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy18g2606	K15803		-	adu:107463233	974.541

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy18g2606	18	128436890	128441840	Ahy18g2606	18	128436890	128441840	ECH