Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2593 ATGTCCAACAATCTGGTTTCGGAGCCGATGCCAAGCATGCAGATGGCTCAGTTGCAGCCAATTGTGACCAAAGTAGATTCTACGGCTGGACAGATGGATATGGGGTTATTGGCTTCTGTAACTGCTGATCCTACTCCACAGCAACGCGGAGGTGCAAATGATCATGTTGGATTGTTGAGAGATGGGTCTGGTGATCCCAGGTCTCGGGGCTTATCGAATTCAGCTATGCAGAGTGTTCGAGTAGAAGCACGAATGAGTAATATGGGTCCACAGCAACTGGTAACAACTCCCAAGCGGAAGGCACCAATGGAATTATCAACTGGTAGCTCTGTGACATCCAACAAAAGGGTTGCACAAGGGGGAAATAGACCTTGGTTGCAGCAAGCTTCTAATCTGTCGAATAAAGGTTCTGCGCAGATGCAATCCCCATCTAATGCCTCCCCCCGCCCTCAGCAATCGGCAGTCTCCAATAAGAGAAAAGTGCAGATGACTGAATCTGTTTCCAGTAAATCAAGTACGCCACGGTCCTCGAATTCTAAAAATCAGAATACGCAGATGAAGCAGCCATCCAAGGTTCAAACAGAATCTTCTGAAAGTGTTAGGTCCAAGATGAGGGAGTCATTAGCTGGTGCTCTGGCCTTGGTTTCTAAGCAAGATAAACCGACCCAGAACAATAACACAATGAATGATGCTGCTACTAATGGGAAATTAGAGAACAACTCTCAGTGGGATGGGTCAGCACCTGCACCCATTGATATTGCCCCAGAGCAAAGGCAAGATATTTCTGAATCTGCTCAGCCTTCTTTTTCTGCAGCTGGTTCAGTTGACCATGCAACAGGAGAGCAGAGAAATAATGCATCTTCTAGTGAAGATTTTTCTGAAAAATTCAAGGATTTTGAAATGGGATCTATAAATATATCAAATAATGAAAATATACTCGGGTTGAACTGTGATAAGCAAGACTTCCAGTCAGATTACACTTTGACTACTGATGATGTTCCATTCAGCGACAGTTTTTTTGTGAAAGATGATCTTTTGCAGGGTAATGGTCTTTCATGGGTATTATCTGATGTGGTAGGCATGGACAATCAAAAGGAAAGTCAAAATATTATAGAGCAGAGACCAGAACCCGAGGAACGATTACCTGAAGTTTTAGCATCAAGGATAGAAGAAGAACTTTTCAAATTGTTTGGAGGTGTGAATAAGAAGTACAAAGAGAAGGGGAGGTCTCTCCTATTCAATTTGAAGGATAGAAATAATCCAGAACTAAGAGAAAAGGTTATGTCGGGTGACATTCGTCCCGAACAATTGTGTTCCATGACAGCAGAGGAACTTGCTTCAAAGGAACTCTCCCAATGGCGGATAGCCAAGGCTGAAGAGCTTGCTCAAATGGTGGTTTTACCTGATTCAGATGTTGATATTAAGAGGTTAGTCAAGAAAACACATAAAGGTGAGTTTCAGGTGGAAGTTGAACATGAAGATAACGTTCCCATTGAGGAGATCTCCAGTGGCACCACATCTTCTAGAAGTCTAACAAGTAGAAAAGGTGGGGAAGCCAGGAGTCAAAAAACTAAAAAAAGTGGGGAGGCCACTTCTTCCAAATCTGCTGTGGTCAAAGAAAATAAAAACACGGATGGTGAGAAGAGCAATTCAGAGAAGGATAATGCATTTTCCATTACCATTTCATCCAACGATGGGACTGATCCAATGCAAGGCCTTATGACAGATGATGCACTGAAGGATCCCGACTTTCTTCCACCAATTGTCTCTCTTGATGAATTCATGGAATCCCTTCATTCTGAGCCACCATTTGAAAATTTACCGATGGAATCAGGTAAAGAAGCTCCTGAATCGAACAAGGACGATTCCAAGGTTGGATCTAAATCAAAATCTTTGGATATTACCCCAAGGGAGCAAGCTGGTGTCACCCCTGATAAATCTGAAAATCTAGATGCCAAAGGTGAAAAACTGGTTAATGCAGAATCTGGGTCTACTTCTGATAGACGTTGCAATGAGAGCGAAGCTGGCGTGAAGCCAACTGATGATCATGCAAAGGAAAGGTTAACGGATAACAAGAAGAATGCTTCTGTTGATGCTGAGCTGAGAACAAGTAATTTTAATGCTGAAGAGCGACATGGCAATAATAGCTTGTATGCAAAAACTGCAGTACATACTAAGGGTGAATGCTTCTGGGACGGAATGCTTCAACTGAATATATCTACGACTGATTCAGTAATAAGCATATTTAAAAGTGGTGAGAAAACTACTGCAAAAGACTGGCCTGGTTTTCTTGAGATCAAGGGAAGGGTTCGACTTGAAGCATTTGAGAAATTTTTGCAAGAGCTTCCTCAGTCAAGAAGTCGTGCTATAATGGTCGTACACTTCGTTTCGAAAGGGTCTTCACCTAGCCAGCAATCAACACTTCGTGAGGTGGCTGAATCTTATATTACGGATGAGAGAGTGGGATTTGCTGAGCCTGTGTCTGGAGTTGAACTTTACTTTTGCCCACCTCATAACAAAACAGTTGAAATGCTGAGCAAGATACTTCCAAAGGAACAAATTGAGGCAGTTAATTCTATTGATAATGGCCTAATTGGTATTATTGTATGGAGAAAAACTAATTTAATTTCGTCAACAATTTCACCCACCGCTTCATCACAACACAAACATAGTAGTAGTAGTAGCTCTAAAAGGCAACAATACTTCTCTAGGAGACAGCAAGATGGTAGTAGTAATTTGAATGTGAATGTTGCTAATCCCTCTAATCCACCACCGAATGGTGTTGATGATGATGATGATGACATTCCTCCTGGGTTTGGGCCTCATCAGGCCCGGCCCGAGGATGACCTACCTGAGTTCAGTTTCATGGGTGGTCCAAACACATCATCACACATGGTCCAAAGACCTAGGGGACCACCAGGTATGGTTCCATTCCAAATGGTTAACCAGGCCCCATCACGCCCTGTTGATCAAATGAGGGAGCTTGTGCACAAATATGGTCAAAGCAAAGTAAATTCACATCATTCAGGAAATTGGCAAGACAAATTTGGTGGTTCAATCCAACCTTGGAATGATGATGATGATGATATACCTGAATGGCAGCCGCAAAACTCACAACAGAACCACCAGTTCCCACCACCACCACCACCCCAATTGGCATTGCACCAACAAAACTTTCACCTTAGACCTCACTTGATGAATCAATCTTTCCCAGGTTCACCGACTCTGCCAACACCACCACATCTTCAACCACCTATGAATGTGACACATGGCCAAAGAAATATTGGTCCAAATTGGGTTCCTCCTAACCAGGGAAACAACCACCTGCAACCAAGTGGTGGACAGCACTATGGTGCTCCTATGCAAGGCACGTGGCCTGAAAATGTTACTAGAAGTAGGGGATTTTAG 3408 0.4308 MSNNLVSEPMPSMQMAQLQPIVTKVDSTAGQMDMGLLASVTADPTPQQRGGANDHVGLLRDGSGDPRSRGLSNSAMQSVRVEARMSNMGPQQLVTTPKRKAPMELSTGSSVTSNKRVAQGGNRPWLQQASNLSNKGSAQMQSPSNASPRPQQSAVSNKRKVQMTESVSSKSSTPRSSNSKNQNTQMKQPSKVQTESSESVRSKMRESLAGALALVSKQDKPTQNNNTMNDAATNGKLENNSQWDGSAPAPIDIAPEQRQDISESAQPSFSAAGSVDHATGEQRNNASSSEDFSEKFKDFEMGSINISNNENILGLNCDKQDFQSDYTLTTDDVPFSDSFFVKDDLLQGNGLSWVLSDVVGMDNQKESQNIIEQRPEPEERLPEVLASRIEEELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELREKVMSGDIRPEQLCSMTAEELASKELSQWRIAKAEELAQMVVLPDSDVDIKRLVKKTHKGEFQVEVEHEDNVPIEEISSGTTSSRSLTSRKGGEARSQKTKKSGEATSSKSAVVKENKNTDGEKSNSEKDNAFSITISSNDGTDPMQGLMTDDALKDPDFLPPIVSLDEFMESLHSEPPFENLPMESGKEAPESNKDDSKVGSKSKSLDITPREQAGVTPDKSENLDAKGEKLVNAESGSTSDRRCNESEAGVKPTDDHAKERLTDNKKNASVDAELRTSNFNAEERHGNNSLYAKTAVHTKGECFWDGMLQLNISTTDSVISIFKSGEKTTAKDWPGFLEIKGRVRLEAFEKFLQELPQSRSRAIMVVHFVSKGSSPSQQSTLREVAESYITDERVGFAEPVSGVELYFCPPHNKTVEMLSKILPKEQIEAVNSIDNGLIGIIVWRKTNLISSTISPTASSQHKHSSSSSSKRQQYFSRRQQDGSSNLNVNVANPSNPPPNGVDDDDDDIPPGFGPHQARPEDDLPEFSFMGGPNTSSHMVQRPRGPPGMVPFQMVNQAPSRPVDQMRELVHKYGQSKVNSHHSGNWQDKFGGSIQPWNDDDDDIPEWQPQNSQQNHQFPPPPPPQLALHQQNFHLRPHLMNQSFPGSPTLPTPPHLQPPMNVTHGQRNIGPNWVPPNQGNNHLQPSGGQHYGAPMQGTWPENVTRSRGF* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2593 1135 Gene3D - 354 448 IPR036575 GO:0006351
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 36 291 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 497 581 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 1003 1018 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 553 570 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 1102 1135 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 881 972 - -
Ahy18g2593 1135 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 71 1122 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 881 923 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 1003 1054 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 595 696 - -
Ahy18g2593 1135 PANTHER SPOC DOMAIN / TRANSCRIPTION ELONGATION FACTOR S-II PROTEIN 71 1122 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 259 287 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 102 197 - -
Ahy18g2593 1135 SUPERFAMILY Elongation factor TFIIS domain 2 378 449 IPR036575 GO:0006351
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 614 628 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 217 246 - -
Ahy18g2593 1135 Pfam Transcription factor S-II (TFIIS), central domain 369 461 IPR003618 GO:0006351
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 499 515 - -
Ahy18g2593 1135 SMART mid_6 362 456 IPR003618 GO:0006351
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 667 696 - -
Ahy18g2593 1135 MobiDBLite consensus disorder prediction 67 94 - -
Ahy18g2593 1135 Pfam SPOC domain 726 870 IPR012921 -
Ahy18g2593 1135 ProSiteProfiles TFIIS central domain profile. 359 473 IPR003618 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2593 Ahy-Chr18 128120164 128125936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2593 - - gmx:100808809 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2593 18 128120164 128125936 Ahy18g2593 18 128120164 128125936 ECH
Ahy18g2593 18 128120164 128125936 Ahy8g2362 8 46063543 46069200 hybridization