Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2589 ATGGTTTTGCACTCTTCTCTCTCACTCTCACTCTCTCTCTTCCCCTTTCTCAGTCCCAACAACAATAACAACCACCTTATCCTCAACAACCTCCTTAATCAACACAAACACAAACGCAAACACTTGTCATGTTGTGCTCTGAAACCCACTTCCCAAAATAATACCTTCTTTAGAAGGGATTTTGTTCTCTTTGGCCTCACTTCACTCTCTCTAACATCCCCACTTTCTGCGACACTTGCTGAAGAAGAACCGAAAATGGCTTCCTTTGAAGATGAATTAAATGCCTATTCTTATCTCTACCCGGTTGAGTTGCCATCTAAGAAATTTGTCTTCAAATGGGTAGAATCACGAAAGCCTGAGCGATACTCTTCAGCTGCGCCACTTTCTCCTGACGCTCGCCTGCGCATTGTATCGGAGCGTGTTGATATTATTGATAATCTTATCATCTCTGTCACGATAGGTCCCCCAAATTCGAGCATTATAAAAACAACGGATAAGAGTAAATGGACTGCAAGAGAGGTTGCTGATTCGGTTTTATCTGACAAATCAGCACTGCGAGTTACCTCCAGTCAGCGCTTAGCTGAGAGTTCAGTTCTTGATACGCATTCCGGGGAAATTGATGGGGAGCCTTATTGGTATTATGAATACCTTGTTCGCAAATCACCAATAAAAGTTACACCGGATTCAAGTGTCTTTCGCCACTATCTTGCTTCAACAGCTGAAAGAGATGGTTATTTCTATTCTATCAGTGCTTCAACTCTTAGCCCACAGTGGGAAAAGATGGGGCCTTTCCTTGAAAAATCAGTGAGCTCGTTCCGCCTTTTAAAGCCAACGGAAAATTATGTTCCTCCTTATAAAGATCCTTGGAGATTTTGGTGA 879 0.4255 MVLHSSLSLSLSLFPFLSPNNNNNHLILNNLLNQHKHKRKHLSCCALKPTSQNNTFFRRDFVLFGLTSLSLTSPLSATLAEEEPKMASFEDELNAYSYLYPVELPSKKFVFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSSIIKTTDKSKWTAREVADSVLSDKSALRVTSSQRLAESSVLDTHSGEIDGEPYWYYEYLVRKSPIKVTPDSSVFRHYLASTAERDGYFYSISASTLSPQWEKMGPFLEKSVSSFRLLKPTENYVPPYKDPWRFW* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2589 292 PANTHER - 27 292 - -
Ahy18g2589 292 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC 27 292 - -
Ahy18g2589 292 Pfam PsbP 87 273 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Ahy18g2589 292 SUPERFAMILY Mog1p/PsbP-like 88 274 IPR016123 -
Ahy18g2589 292 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 73 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2589 Ahy-Chr18 128045178 128049439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2589 - - aip:107613091 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2589 18 128045178 128049439 Ahy18g2589 18 128045178 128049439 ECH
Ahy18g2589 18 128045178 128049439 Ahy8g2357 8 46007454 46011498 hybridization