LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy18g2587	ATGGAAGATAGAGAAGGGAACTCACATGGCGCTGCAATTCCCAAAAAATCGAGATCTTTGGATCTGAAGAGTTTGTATAAATCAAAAGTTACAAACGAGGCCCCTGAGAAGAACCTAAAGAGGAAAGGGAGTAATCATGGTGGGGGTGGTGATGAGAAGAGGAGCAAGAAAAAGAGGAGTAGAAAGGAACTGCCTCTAAGCAGCCTAGAAAATGCTGATGGTTGCATCAAGAAGGTTGTTGATGAAGAATCTCACAAAGGGCCTGGCTCCAGTAGGCAGGATTTGTGTGAACATAAGTTGGAGGCCAAGCAGGGATTGAGTAGCAGTAGTGGGGTTAATAGACATTCACTAATTCTCAGTGATGGTCCTGTATGTATTCCAAAGCGAAAGAGGGATTTTGTGGGGCGGAAGAAATTTGAAGTTCGTCAAGCACCGAACCTGGCAGGTCAGCCAAGTGGTAGAAGTTGCAATGGCGATCAGTTGCCTAAGTTAAGCATTGATGATTTGGACAGGGGGGTTGAGTCTTCAAAGACTAAACAGAAGGATGTTGATGAGATTAAGGAAAGTAGGAGTTGTGATTCAAGTTCTGTGCAGCATTTCAAGGGTAAGGAGGAGAGTGCCTGTCATTCTGCTGTAAATAGTGGTGATTCCTCTTTAAAGAGGCCACGGAGGAAGGATAGGAAGCGAAAGGCTTTGTCTTCAGATAGAATTAGGGTTGCCAAGGAGGCTGAGCCTCTAATAGATAGCAGTAAAATATCTGATCATTTGCGGGAGGATGATGAGGCAAATCTTGAGGAGAATGCAGCAAGGATGCTATCTTCACGGTTTGATCCAAACTGTACTGGTCTGTCCTTTTTGCTGCCTTCTAGTAGAAATATTAGTAGTCATGGATCAAAGTCTCCAGGTTCAGAATCAGCGTCAGTTGATACTGCCAATAGAGTCTTGAGACCAAGGAAACTGGACAAAGAGAAGGGTAGTTCCAGGAAGAGGCGGCACTTCTATGAAATTTTGTTAGGTGATTTGGATCCGGACTGGGTATTGAACCAGAGAATTAAGGTTTTTTGGCCGTTGGACCAGAGTTGGTACTATGGCCTTGTTGATGGCTATGACAAAGAAAGTAAGCTTCACCATATCAAATATGATGATCGGGACCAAGAATGGGTTAATCTTCAAACTGAGAGGTTCAAACTCCTTTTATTTCCTAGTGAAGTTCGAAGAGAAGCAGGGGAAAAAAGAACAGTAAAGAAAAGTATGGATTCTGATGCACAAAAAGGGAGCAAGTCCAGAAAAGAAAGGCAAGTAAGAGATGATATTACAGAGGATGATAGCTGTGGAGAAAACTGTATGGACACAGAGCCTATAATCTCATGGTTGGCTCGATCTTCTCATCGGGTTAAATCTTCTGCTTTGCATGGTATTAAAAAACATAGGTCCTCTGGTCCTCTTCCAGGTACAGTCTCATCCTTTTATGATGAACCCGTAAAAGTACAGGGATGCTCAACCAAGAGTTACTTGAGAGAGGGTAAAGGTAGTATCTCCAGTGGTTCTGTTTCACATGATAAATTAGGTGACAATCTTGGGAAGAAGTCCTCATTGCAAAGTGCCAATTGCCACAAAGATGGCAAACAGCCTATTGTCTATGTTAGGACAAGGCGTAGGCCAACATCAAAATCCCCTCTTGTCCCTAAAGAGATGCATGCTAATATAAATGCTTCTTGTTCCATTGTCAGAGAACCAGTTGACAGGAGTGTTGAGACTAAGGGTCCATTGCGGTTGACATATTCAGAAGGAGTAACTAAACTTTGGTTGGACACAGGGTCAGCAGCATTCAAATTCGACTTCAATTTTCCAATACGCTCGGTGCTGAATGACTCGTTTAGATCTGACAATTTGTGGCTGGTCCGTGCTGTTCTGCTGCTTCGTTATGGAACAGTTATAACCATGTGGCCAAGAGTTCATTTGGAGATGCTTTTTGTTGATAATGTGTTTGGGCTTAGGTTCCTGTTGTTCGAAGGATGCTCAAAGATGGCTGCGGCATTTGTCTTTTGGGTCCTTAGAGTATTTAACCAACCTGTCGATCAGGGGGAATATATTGACTTGGAGTTGCCAGTTACATCGATCAGATTCAGGTTTTCAAGTGTTCATGTCATTAAAAAGCCACTTGTATTTGCTTTTTACAATTTCTCAAGAGTGGAGAATTCAAAGTGGATGTACTTGGATTCAAAGCTTAAGAAACATTGCTTACTCAGTAAGCAGCTCCATCTCTCTGAATGCACGTATGATAACATCCAGGCACTTCAAAATGGAACAAGTGGGCATCCTGTTACATCCATCAGTGGGCAGCCATCCACAGTAAAGATCATGCGAAAGAGGACTAGACCGGGGATTAATATTATGGGTGTTTCTAGAGAGTTCACTCGGGTTGACACCCATCAGTCTTCTGATGCCGGAAAGAGGAAGGTTTTTCCTTTTTCTCTTTCTTTTGCGGCTGCACCCACATTTTTTCTCAGTTTGCATCTTAAGTTGCTGATGGAGCAGTCAGTAGCTCATATAAGCTTTTGTGATAAAGCCTTGGTAGATGCTCAGGAAGACTCTGGTCTGAAGACAGATGGTTGCTCTGAAAGGAGGGAAGAGTTTAATTTGGACAAAGTTATGATGACTTCATCAAAGGATGTTGTGTGTGATGGATTGGTTTGTGCCAAGTCCAATCCGATAATTTGTGCATCTGATTGCAGTGGTGGAATTCTTTCTCAAAATCAACAGAATATCGGTCTTAGTGATGATAGAACTTCTGGTTGTAATGTTCCAGAGAGGCCAGCTGCTATTCAGTTACCAAGGTGGCAATCCGATCATTCTGATGTGTGCACTTTGCCTTCAAGTTCTTTACCTGATGAGGTTAAAGCTGATGATGGCTGCTCACTGTCTCCTACTTCTTTAACTGCTGATGTTAAAGCTAATGATGGTTCTCATTCATTTCGCGGTGTCATTCAAAGCCCCAATCCAACTGCTCCCCGAAGTTCTTGGCATCAAAACAAAACTAATTCCACATTGGGATTCAAGTCACATGGATGGTCCGATGGGAAGGTTGATTCTCTTCAAAATGGCTTTAGTAATGGACCAAAGAAGCCACGGACACAAGTATCTTATTCAGTTCCTTTTGCTGGTTATGATTTTGGCTCGAGGCATAGGGGTCATCAGAAAGGGCTACCTCACAAGAGGATTAGGAAAGCTAATGACAAGAAGTCATCAGATGTTGCTAGAGGTCCTGAAAAGAATTTGGAGTCCTTATCTTGTGATGCAAATGTCTTGATTACCCTTGGGGATAAAGGGTGGAGAGAATATGGTGCCCAGGTTGTTTTAGAGCTGTTTGACCATAATGAGTGGAAACTTTCTGTAAAACTTGCAGGAGTTACTAGGTACTCATACAAAGCACATCAGTTTCTGCAAACTGGATCAACTAATCGCTATACGCATGCTATGATGTGGAAAGGAGGGAAAGATTGGGTCTTAGAATTTCCTGATAGGAGTCAGTGGGCTCTTTTCAAAGAGATGCATGAGGAATGTTACAACCGTAACATCCGTGCGGCTTCAGTTAAAAATATACCTATTCCAGGTGTTATCTTGATTGAAGAAAATGATGGTCATGAATCTGAAGCTAGTTTTGTTCGGAGTTCTAAATATTTTCGCCAAGTTGAAACAGATGTTGATATGGCCCTGAATTCATCAAATGTCCTGTATGATATGGACAGTGAGGATGAGCAGTGGATTTTGACTTTGCAAAATTCTGAAAAAGACAATTATAGCATGGATGGGATCTCGGAGGAAATATTTGAGAAGACAATAGATAGGTTTGAAAAGGCTGCATATGCTCAGAAGCAAGACCAGTTTACACCTATTGAAATAGAAGAACTCATGGTTGATGTTGCAACGATGCCTATAGCCAAAACCATTTATGAATATTGGCAGCAGAAAAGGCAGAAGAGAGGAATGGCTTTGATACGGCATTTTCAGCCACCTCAATGGGAAAGATACCAACAACAATTGAGAGAGTGGGAAGTAGCCATGAGCAAGAATAACATCCCTCATTCTAATGGATGCCTGGACAAGTTTGCACCTTTGGAGAAGCCTCCCATGTTTGCTTTCTGTTTGAAACCAAGGGGTTTGGAAGTACCGAACAAGGGATCAAAACAACGTTCACAAAAGAGAATTTCAGTGTCAGGGCATGCAAACAGTATTATGTATGAACATGACGGTTTCCACACTCCTGGAAGGAGATTGAATGGATTTGCATTTGGTGATGAAAGGATTTCTTATCCAGGCCACAATTATGATTCTTTGGATGATTCCCCATTGCCTCAGAGCTCACTGAGGGGATTCTCACCACGTGATGCTGGCAGCGTGAGATATTATTTTATGAACAATGGTGGGTTTGACAGGAAATATACACCTAAACATCACCGGAACAAGCCAAGGAATATGTATCATAATGATTCACACTTGATTTCTGATAGTCCGAGATTGTCGGGGTCAGGGAAGAGAAATGGGGTTAATCAATGGAACATGGGCTATTACGACATGATGGGTCACAGGAAGTACCCAATGGATGGCCCTCAAGGGCATGACTTTGAACAATTAGATGGTTCAGATCTTGATGAGTTTAAATTGCGTGATGCCTCAGGTGCTGCTCGGCATGCACATAACATGGCCAGATTAAAGAGAGAGAGGGCTCAAAGACTGCTTTACCGAGCAGATCTAGCAATTCACCGTGCTGTTGCTGCTCTCATGACTGCTGAAGCGATAAAAGCTTCGGAGGACTCGAATGGTGATGGGTAG	4833	0.4258	MEDREGNSHGAAIPKKSRSLDLKSLYKSKVTNEAPEKNLKRKGSNHGGGGDEKRSKKKRSRKELPLSSLENADGCIKKVVDEESHKGPGSSRQDLCEHKLEAKQGLSSSSGVNRHSLILSDGPVCIPKRKRDFVGRKKFEVRQAPNLAGQPSGRSCNGDQLPKLSIDDLDRGVESSKTKQKDVDEIKESRSCDSSSVQHFKGKEESACHSAVNSGDSSLKRPRRKDRKRKALSSDRIRVAKEAEPLIDSSKISDHLREDDEANLEENAARMLSSRFDPNCTGLSFLLPSSRNISSHGSKSPGSESASVDTANRVLRPRKLDKEKGSSRKRRHFYEILLGDLDPDWVLNQRIKVFWPLDQSWYYGLVDGYDKESKLHHIKYDDRDQEWVNLQTERFKLLLFPSEVRREAGEKRTVKKSMDSDAQKGSKSRKERQVRDDITEDDSCGENCMDTEPIISWLARSSHRVKSSALHGIKKHRSSGPLPGTVSSFYDEPVKVQGCSTKSYLREGKGSISSGSVSHDKLGDNLGKKSSLQSANCHKDGKQPIVYVRTRRRPTSKSPLVPKEMHANINASCSIVREPVDRSVETKGPLRLTYSEGVTKLWLDTGSAAFKFDFNFPIRSVLNDSFRSDNLWLVRAVLLLRYGTVITMWPRVHLEMLFVDNVFGLRFLLFEGCSKMAAAFVFWVLRVFNQPVDQGEYIDLELPVTSIRFRFSSVHVIKKPLVFAFYNFSRVENSKWMYLDSKLKKHCLLSKQLHLSECTYDNIQALQNGTSGHPVTSISGQPSTVKIMRKRTRPGINIMGVSREFTRVDTHQSSDAGKRKVFPFSLSFAAAPTFFLSLHLKLLMEQSVAHISFCDKALVDAQEDSGLKTDGCSERREEFNLDKVMMTSSKDVVCDGLVCAKSNPIICASDCSGGILSQNQQNIGLSDDRTSGCNVPERPAAIQLPRWQSDHSDVCTLPSSSLPDEVKADDGCSLSPTSLTADVKANDGSHSFRGVIQSPNPTAPRSSWHQNKTNSTLGFKSHGWSDGKVDSLQNGFSNGPKKPRTQVSYSVPFAGYDFGSRHRGHQKGLPHKRIRKANDKKSSDVARGPEKNLESLSCDANVLITLGDKGWREYGAQVVLELFDHNEWKLSVKLAGVTRYSYKAHQFLQTGSTNRYTHAMMWKGGKDWVLEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVILIEENDGHESEASFVRSSKYFRQVETDVDMALNSSNVLYDMDSEDEQWILTLQNSEKDNYSMDGISEEIFEKTIDRFEKAAYAQKQDQFTPIEIEELMVDVATMPIAKTIYEYWQQKRQKRGMALIRHFQPPQWERYQQQLREWEVAMSKNNIPHSNGCLDKFAPLEKPPMFAFCLKPRGLEVPNKGSKQRSQKRISVSGHANSIMYEHDGFHTPGRRLNGFAFGDERISYPGHNYDSLDDSPLPQSSLRGFSPRDAGSVRYYFMNNGGFDRKYTPKHHRNKPRNMYHNDSHLISDSPRLSGSGKRNGVNQWNMGYYDMMGHRKYPMDGPQGHDFEQLDGSDLDEFKLRDASGAARHAHNMARLKRERAQRLLYRADLAIHRAVAALMTAEAIKASEDSNGDG*	1611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	75	98	-	-
	Ahy18g2587	1610	PANTHER	PHD FINGER PROTEINS	2	1609	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	292	310	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	506	537	-	-
	Ahy18g2587	1610	PANTHER	OS01G0179500 PROTEIN	2	1609	-	-
	Ahy18g2587	1610	Gene3D	-	347	393	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	135	237	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	506	520	-	-
	Ahy18g2587	1610	Pfam	Enhancer of polycomb-like	1194	1286	IPR019542	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	409	442	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	409	443	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	996	1025	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	292	326	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	164	206	-	-
	Ahy18g2587	1610	SMART	TUDOR_7	343	401	IPR002999	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	1060	1091	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	1	98	-	-
	Ahy18g2587	1610	MobiDBLite	consensus disorder prediction	33	66	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy18g2587	Ahy-Chr18	128006565	128013206	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy18g2587	-		-	vun:114163981	2050.79

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy18g2587	18	128006565	128013206	Ahy18g2587	18	128006565	128013206	ECH
	Ahy18g2587	18	128006565	128013206	Ahy8g2355	8	45981908	45988559	hybridization