Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2571 ATGACGAACGCAGAAGAACACAGTGGAGGCGAGGAGAATACGATGGAGGATGAGATTCTGAGGCTACGAGGACGATGGGAACTCGCTTCTGTTCTCAACTTCTTCGACGTGTTTAGCTCAATACTCGGCAAAGAATTCAAGCTTTCTGCTGAAGAGTTAGAAATTGGGATTGTCAAGCCTGACTCTGCACTTGCTCAGCTTCACATTCAACTTTTGAAGGGGATACCACCAGTGAATAAAAATTTGGTTAATTCTGACAAATGGGTGACTGCTCTTTGCAAGAAACTAGCTATGTGGTGGTCATGGGTTGCTGAGGGGAAGATTCCACTTGTGCCGTCTAACGGAGAGGAGATATCCAAATACAAGGAACTTACTCCACTGGATCGTTTGCGACTGCTAAAAGCACTATGTGAAGTTCGAGCTGAACAAAATGATGCAGTATCATACATTAATGATTCTTTAAAAGAAGGAACAGAACTTACCTCTTTTCGCAAAGTAGCCTTAGGAAGAGATGGAACTGACACTTCCATTTGGTATGATGCAAATGCAAAATGCAAGAGTCACAGATTGTATAGGGAAATAATCACATCAGACTCAAGTTCACAGAATGATGTCAATGGCTGTTTATCAATTCCCATCAATTTTCAATGGGAAACACTTGCCTCCAATCTGGAAGAATTTTCAAAAGCAGCTGAAACATTTTCATGTAGCAAATCTTCTGTTGAAGTTGCTATTAGTAAGAAACTTGAAAGTGATGTCATTCCTGTTCTTGAAAAGCTTAAAAAGAATGAAGAAAGAGCAGCAATACGAAAGCAACGACAGGAGATGCTATCAACTGATTTTCGGAATTATTGCTCAGGAAATACACGCTCTTGTCGCACTCGCAGGCCTGTTAATTACTCACTTGAAGCTTATGATCGTACCATGAAGGAAGCTATACAGTTAATAAATACAAGGAAAAGGTCTTCAGGCACTGAACGAGACAAAAACACAGGATCAGAAGATAAATCCAACAGCAAGGATGATTCATCAGAGAGTGATTCCAAACAGGATGTGGTTCCCATATCAGACAGTGATGATACTGGTTATGAACATGAGGATTGTGGTTACAGTGAGGAGCAAGATGATGATGCTGATAGTAGTGAGCTGGGAAATTCAGAAGCGCATTCAAGCCGTGCAGCTCCTTATACAAAGGAAGTGCATTCAAGCCACGCAGTTTCTTATCCAAGGGGAGTTCGCTACAGCAAGCGGTTAGCTGGAGTCCCTAGCCATACCCTTGCAGAAAGCAGAGGTTTGGTCTCAAAGCAAAGACTGAGACAGAGACCCACTCGAAATTCTGCCTTAGAATCTATTGTTATTCCAGATTCAGATGATGAAGAACAAGAGAATGAAGACATTTCGGAGTCCAATTAG 1413 0.4168 MTNAEEHSGGEENTMEDEILRLRGRWELASVLNFFDVFSSILGKEFKLSAEELEIGIVKPDSALAQLHIQLLKGIPPVNKNLVNSDKWVTALCKKLAMWWSWVAEGKIPLVPSNGEEISKYKELTPLDRLRLLKALCEVRAEQNDAVSYINDSLKEGTELTSFRKVALGRDGTDTSIWYDANAKCKSHRLYREIITSDSSSQNDVNGCLSIPINFQWETLASNLEEFSKAAETFSCSKSSVEVAISKKLESDVIPVLEKLKKNEERAAIRKQRQEMLSTDFRNYCSGNTRSCRTRRPVNYSLEAYDRTMKEAIQLINTRKRSSGTERDKNTGSEDKSNSKDDSSESDSKQDVVPISDSDDTGYEHEDCGYSEEQDDDADSSELGNSEAHSSRAAPYTKEVHSSHAVSYPRGVRYSKRLAGVPSHTLAESRGLVSKQRLRQRPTRNSALESIVIPDSDDEEQENEDISESN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2571 470 MobiDBLite consensus disorder prediction 431 470 - -
Ahy18g2571 470 MobiDBLite consensus disorder prediction 321 368 - -
Ahy18g2571 470 Coils Coil 257 277 - -
Ahy18g2571 470 MobiDBLite consensus disorder prediction 316 408 - -
Ahy18g2571 470 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 20 397 - -
Ahy18g2571 470 PANTHER REMODELING AND SPACING FACTOR 1 20 397 IPR028938 GO:0006355|GO:0031213
Ahy18g2571 470 MobiDBLite consensus disorder prediction 453 470 - -
Ahy18g2571 470 MobiDBLite consensus disorder prediction 436 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2571 Ahy-Chr18 127557309 127561558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2571 - - adu:107463013 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2571 18 127557309 127561558 Ahy18g2571 18 127557309 127561558 ECH
Ahy18g2571 18 127557309 127561558 Ahy8g2346 8 45804590 45808723 hybridization