Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2552 ATGGGTTTGAGAAACACATCTGTTCTGTGCTTGGCACTGTTTCTTGCTTTCTCTTCATGCATTCATGGGTTAGATATCACTAGCGCACTCAGCAAATACCCAGAATTCACCAAGTTCAGCAAGTACCTCACCGAAACCAAGCTTGTTGATCAAATCAACGGCCAGAAAGCCGTTACCGTCCTCGCCCTCGGCGACGACGCACTCGCCTCCCTTGACGGGAAGCCCCGGGACTACATCAAGGCAGTCCTGGCCAACCACGTGGTTACCAACTACTACGACGAGAAGCTTCTCGTCGGAGCAGTTGGTAGCCACGAGAAGTTGGCCACACTCTCATCTTCTGGAATCTTCGTCAACTTGATAAACGATGGCGAGGTGGCTTTTGCACCCGCCGAGAAAGAACAGTATGAGAGCAAGCTCGTCAGAACCGTTGAAACTCAACCCGAATCACTTTCAATCTTGGAGGTTCATCAGCCTATTTTTGCTCCATCCGCCGTTGCCAACGCCGTCGCAGCCACCGTGTCGTCGGAAGGGAAGAAGGTTCAAGAAGCAGCAGCCGGTGTTAGCGGCGGTTGTCGCGTCGAGATGGGGCTCTTTGGGGGAGTAGTTATTGCCTTGGTTTCGCTCTTTGCTTCATTGTAA 639 0.5211 MGLRNTSVLCLALFLAFSSCIHGLDITSALSKYPEFTKFSKYLTETKLVDQINGQKAVTVLALGDDALASLDGKPRDYIKAVLANHVVTNYYDEKLLVGAVGSHEKLATLSSSGIFVNLINDGEVAFAPAEKEQYESKLVRTVETQPESLSILEVHQPIFAPSAVANAVAATVSSEGKKVQEAAAGVSGGCRVEMGLFGGVVIALVSLFASL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2552 212 ProSiteProfiles FAS1/BIgH3 domain profile. 23 144 IPR000782 -
Ahy18g2552 212 SUPERFAMILY FAS1 domain 20 122 IPR036378 -
Ahy18g2552 212 Pfam Fasciclin domain 34 120 IPR000782 -
Ahy18g2552 212 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Ahy18g2552 212 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 176 IPR033254 -
Ahy18g2552 212 Gene3D FAS1 domain 24 174 IPR036378 -
Ahy18g2552 212 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2552 Ahy-Chr18 127285147 127286078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2552 - - adu:107463005 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2552 18 127285147 127286078 Ahy8g2331 8 45637576 45638214 hybridization