Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2529 ATGCAGAGCGGGCGTGGTAACGAGGTTTTCGACGTGATCATCGTCGGCGGCGGTGTAATGGGAAGCGCCACCGCGTATCACGCTGCAAAGAGGGGTCTCCGGACACTCCTCCTCGAGCAATTCGACTTCCTCCACCACCGTGGCTCCTCCCACGGCGAGTCCCGCACAATCCGCGCAACGTACCCACAGCACCATTACTACCCACTCGTCATGGAATCTTACACGCTCTGGCAGCAGGCCCAGGCCCAAATCGGCTACACCGTCTACTTTCCGGCCCACCATCTCGATATCGGCCCGGCTCAAGACCCAATCCTCCGCGCCGTCATCGACAATTGCCGCCGGCACGCCATGCCGCACGAGGTCCTCAACCGCCGCCAGCTGGCGTCGAAGTTCCCGGGCCGCATCGACATGCCGGACGATTGGATCGGAATATTCAACCGCCTCGGCGGCATCATAAAGCCGACGAAGGCGGTTGCCATGTTCCAATCGCTAGCGCACAAATACGGTGCAGTTTTAAAGGACAAAGCTGAAGTAATCGACGTTAAAAAAGACGGAGAAAACGGCGTCGTTGTTTTTACATCTAACGGCGAAAGTTATCGAGGAAGGAAGTGTGTTGTAACGGTAGGAGCATGGGTTAACAAGCTTGTGAAGAAAGTGAGTGGAGTTGAATTACCGATTCAGCCACTAGAGACTCATGTGTTTTACTGGAGGGTGAAGGAGGGGCACGAAGGGGATTTCGCAGTAGGGGGCGATTTTCCTACCTTTGCTAGCTGTACAGGGGAAGGAGGGATTTACGTGTACGGAACACCATCATTGGAGTTCCCGGGTTTGGTTAAGGTCGCGGTCCACGGTGGAAATCCGGTTGACCCGGATAAAAGACCTTGGGGTTCAGGGTATAGGGTTCAAGATTTAAAGAAGTGGATTCAACAGACGTTCATGGGCTTGGTCGATTCGAGCGAGCCCGTGGTGAAGCAGGCCTGCATGTATTCTATGACGCCAGATGAAGATTTTATTGTGGATTTCTTGGGTGGGGAGTTTGGGAAGGATGTGGTAGTGGGTGGCGGGTTTTCGGGTCACGGGTTCAAGATGGCTCCGGTTATTGGAAGGGTTTTAACTGAGCTTGCTATAGATGGGGTTGCAAGTGGGGTTGACATCAAACCCTTCAGGATTTCAAGGTTTAGCATGAATTCTAGGATTTGA 1200 0.5358 MQSGRGNEVFDVIIVGGGVMGSATAYHAAKRGLRTLLLEQFDFLHHRGSSHGESRTIRATYPQHHYYPLVMESYTLWQQAQAQIGYTVYFPAHHLDIGPAQDPILRAVIDNCRRHAMPHEVLNRRQLASKFPGRIDMPDDWIGIFNRLGGIIKPTKAVAMFQSLAHKYGAVLKDKAEVIDVKKDGENGVVVFTSNGESYRGRKCVVTVGAWVNKLVKKVSGVELPIQPLETHVFYWRVKEGHEGDFAVGGDFPTFASCTGEGGIYVYGTPSLEFPGLVKVAVHGGNPVDPDKRPWGSGYRVQDLKKWIQQTFMGLVDSSEPVVKQACMYSMTPDEDFIVDFLGGEFGKDVVVGGGFSGHGFKMAPVIGRVLTELAIDGVASGVDIKPFRISRFSMNSRI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2529 399 Pfam FAD dependent oxidoreductase 11 374 IPR006076 GO:0016491
Ahy18g2529 399 TIGRFAM soxA_mon: sarcosine oxidase, monomeric form 10 397 IPR006281 GO:0008115
Ahy18g2529 399 PANTHER PEROXISOMAL SARCOSINE OXIDASE 5 397 IPR045170 GO:0016491|GO:0050660
Ahy18g2529 399 PANTHER PEROXISOMAL SARCOSINE OXIDASE 5 397 - -
Ahy18g2529 399 SUPERFAMILY FAD/NAD(P)-binding domain 10 395 IPR036188 -
Ahy18g2529 399 Gene3D - 93 331 - -
Ahy18g2529 399 SUPERFAMILY FAD-linked reductases, C-terminal domain 227 333 - -
Ahy18g2529 399 Gene3D - 10 378 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2529 Ahy-Chr18 126649210 126651203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2529 K00306 - gmx:100789864 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2529 18 126649210 126651203 Ahy8g2312 8 45386645 45388774 hybridization