Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2526 ATGGCTCCAAGATTGGATTTTCCCAATTGGTGGAGTAAGGACACACATGATAAAGGAACAACAACAACACCAGTGGTGGTGAAAATTGAGAATCCCACTTTCTCTGTTGTGGAGATTAATGGTGCAGATGCTGCATTCCGGCCGGTGGAGAAGAGCCGCGGCAAGAATGCGAAACAAGTCACATGGGTTCTGCTTCTCAAGGCTCACCGTGCCGTCGGCTGCATTGCTTGGCTTGCCAGTGTAATGTGGACATTGCTTGGAGCCATCAAGAAGAGGATAGTTCATGGACAGGGTGTTGCTATGGAGGGTGAGAGTGACAAGTTGGAGAGAGGGAAGTTGTTGTTTAGAGTCATTAGAGTGTTCTTGGTTGTTTCATTGGCTGTTCTTGCATTTGAGATTGTTGCTTACCTTCAAGGATGGCAATTCAGGAACCCAAATTTGCATATTCTTCCGAATGCCTTGGATTTCGAGGGGTTACTTCACATGGCGTATGTTGGTTGGCTGAGGTTTCGTGTTGAATACATCGCGCCGCCTGTACAAGCACTCTCGAAGTTCTGTGTTGTTTTGTTTCTTATCCAATCCGTGGACCGTATGGTTCTTTGCATGGGATGCTTTTGGATTAGATACAAGAAGGTTAAGCCAAGGTTTGCTGGGGATCCCTTCAAGGTTGATGATGTTGAAGGATCTGCAAGCCATTACCCTATGGTTCTGATTCAGATTCCAATGTGTAATGAGAGAGAGGTGTATGAGCAGTCTATTTCAGCGGTCTGCCAAATTGATTGGCCTAGGGATTGTTTACTGATTCAAGTACTCGATGATTCTGATGATGAAAGCATACAGTGCTTAATTAAGACCGAGGTCTCCAAATGGAGTCTAAAGGGAGTCAACATAATCTATAGGCATCGGTTAAACAGGACTGGATATAAAGCTGGGAATCTCAAATCTGCAATGAGCTGCGACTATGTGAAAGGCTACGAGTTTGTTGCAATTTTCGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAACAAACTGTGCCACATTTCAAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAACTTGTTGACTCGTCTCCAAAACATTAACTTATGCTTCCACTTCGAGGTAGAACAACAGGTCAATGGACTATTTCTCAATTTTTTTGGTTTTAATGGAACTGCTGGTGTTTGGAGGATCAAAGCCCTTGAAGAATCTGGAGGCTGGCTTGAGAGGACAACGGTAGAAGATATGGACATTGCGGTCCGAGCTCATCTCAATGGATGGAAGTTTATCTTCCTAAATGATGTTAAGGTGCTTTGTGAAGTTCCTGAGTCATATGAAGCTTATAGGAAGCAGCAACACCGTTGGCATTCAGGTCCTATGCAACTTTTTAGATTGTGCCTCCCTGCAATTGTTAGATCTAAGGTGTCAACATGGAAGAAAGCAAACTTAATACTCCTCTTTTTTCTTTTAAGGAAACTAATTCTTCCCCTTTATTCCTTCACCCTGTTCTGTATAATTCTTCCTTTAACCATGTTCGTGCCTGAGGCTGAGCTTCCGTTGTGGGTGATTTGCTATGTACCAGTTTTCATGTCATTCCTTAACATCCTCCCTGCCCCAAAATCTTTTCCTTTTATTGTTCCTTACCTTCTTTTTGAAAACACCATGTCCGTCACCAAATTCAATGCAATGGTATCTGGACTCTTCCAATTAGAAAGCTCTTATGAATGGATTGTGACAAAGAAGGCCGGAAGGTCATCTGATTCTGATTTGTTGGAAGCCGAACAAAGGGAAGCCAAGTCGATAGAGCATCAAAAGATCCATAAAGGAGCTTCTGAGAGCGAACTTGTCGAGTTACACCACTTTAAGGAACAAAAAGAATCTGCTCCAACACCTATCAAGAAAGCTAATAAGATTTACAAGAAAGAGTTGACTTTGGCATTCCTCCTCCTCACTGCTTCTGTCCGGAGTCTATTATCAGCACAAGGAGTTCACTTCTACTTTCTGCTTTTCCAAGGGGTGACCTTCCTCCTCGTCGGTCTCGACTTGATTGGAGAGCAAATGAGCTAG 2100 0.4319 MAPRLDFPNWWSKDTHDKGTTTTPVVVKIENPTFSVVEINGADAAFRPVEKSRGKNAKQVTWVLLLKAHRAVGCIAWLASVMWTLLGAIKKRIVHGQGVAMEGESDKLERGKLLFRVIRVFLVVSLAVLAFEIVAYLQGWQFRNPNLHILPNALDFEGLLHMAYVGWLRFRVEYIAPPVQALSKFCVVLFLIQSVDRMVLCMGCFWIRYKKVKPRFAGDPFKVDDVEGSASHYPMVLIQIPMCNEREVYEQSISAVCQIDWPRDCLLIQVLDDSDDESIQCLIKTEVSKWSLKGVNIIYRHRLNRTGYKAGNLKSAMSCDYVKGYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGLFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIVRSKVSTWKKANLILLFFLLRKLILPLYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLESSYEWIVTKKAGRSSDSDLLEAEQREAKSIEHQKIHKGASESELVELHHFKEQKESAPTPIKKANKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2526 699 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 226 453 IPR029044 -
Ahy18g2526 699 Pfam Glycosyl transferase family group 2 328 533 IPR001173 -
Ahy18g2526 699 PANTHER - 21 699 - -
Ahy18g2526 699 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 21 699 - -
Ahy18g2526 699 SUPERFAMILY Nucleotide-diphospho-sugar transferases 233 515 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2526 Ahy-Chr18 126611345 126615346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2526 1 699 Miscellaneous Gene Families AT4G31590 78.317 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2526 - - gmx:100776577 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2526 18 126611345 126615346 Ahy8g2309 8 45352574 45356355 hybridization