Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1622 ATGAAGGGAATACACCTTTCACCACCACCAACACAAACCACGAACACAATCCAATTGCAAACCTTTCCCACCACTACCACCAACCCCAACCAAGTTCAATTCCTCCCATTCCAAACAAAGCATAACAACAAGAAGAAAAAACCCAAGACACCAATCCTATGTCTCTCTTCGACAAACCCATCCAAAATCCACCCACAACCGCCGCTCGTGGTGGTCGGTTCCGCGAATGCCGACATCTACGTGGAGATCGACAGGCTCCCAAAGGAAGGCGAAACACTGCCAGCTAAGACTGGGCAGACCCTCGCGGGCGGGAAGGGCGCAAACCAGGCAGCTTGCGGAGGGAAGCTGTCCTACCCGACGTACTTCGTCGGGCAGGTCGGGCAGGACTCGTATGGGAAGCTTGTGACCGAGGCGCTGAGGAGTGGTGGAGTGTGTCTTGATCACGTGACGACGATTAGTGGTGGAACCCCAACTGGGCATGCTGTTGTGATGCTGCAGTCTGATGGGCAGAACTCCATAATTGTTGTTGGTGGTGCGAATATGAGCTGCTGGCCTGAGATTCTTCCTCAGCATGATCTTGATGTTGTTAGGAACGCTGGCATTGTCTTGCTCCAGAGGGAAATCCCTGATGCTGTCAACATTCAGGTCGCAAAGGCTGCAAGGAGTGCTGGTGTCCCAGTAATTTTTGACGCTGGGGGCATGGATTCTCCAATTCCACAAGAATTACTGAACTATGTTGATATTCTGAGCCCTAATGAAACTGAACTTGGTCGCCTTACAGGAATGGCAACTGAAAGCTTTGAAGATATTGCACAGGCTGCAGCTAAATGCCATAAATGGGGAGTTAAGCAAGTCCTTGTGAAACTCGGGGAGAAAGGATCAGCACTTTTTATTGAAGGAGAAGAACCAATTCAGCAACCTGCCATATTTGCTAAGAAGGTTCTTGATACCACTGGGGCTGGTGATACTTTTACAGCTGCTTTTGCTGTTGCATTAGTTGAGGGCAAATCCAAAAAGGAATGCCTCAAATTTGCCGCTGCCGCGGCTTCTCTTTGTGTTCAAGTGAAGGGGGCCATTCCCAGCATGCCTGATAGGAAATCTGTTCTGGAACTTCTTAACTATCATTGA 1128 0.4956 MKGIHLSPPPTQTTNTIQLQTFPTTTTNPNQVQFLPFQTKHNNKKKKPKTPILCLSSTNPSKIHPQPPLVVVGSANADIYVEIDRLPKEGETLPAKTGQTLAGGKGANQAACGGKLSYPTYFVGQVGQDSYGKLVTEALRSGGVCLDHVTTISGGTPTGHAVVMLQSDGQNSIIVVGGANMSCWPEILPQHDLDVVRNAGIVLLQREIPDAVNIQVAKAARSAGVPVIFDAGGMDSPIPQELLNYVDILSPNETELGRLTGMATESFEDIAQAAAKCHKWGVKQVLVKLGEKGSALFIEGEEPIQQPAIFAKKVLDTTGAGDTFTAAFAVALVEGKSKKECLKFAAAAASLCVQVKGAIPSMPDRKSVLELLNYH* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1622 375 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 316 329 IPR002173 GO:0016773
Ahy18g1622 375 CDD ribokinase 68 364 IPR011877 GO:0004747|GO:0006014
Ahy18g1622 375 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 103 127 IPR002173 GO:0016773
Ahy18g1622 375 Hamap Ribokinase [rbsK]. 67 370 IPR011877 GO:0004747|GO:0006014
Ahy18g1622 375 SUPERFAMILY Ribokinase-like 68 372 IPR029056 -
Ahy18g1622 375 Pfam pfkB family carbohydrate kinase 69 364 IPR011611 -
Ahy18g1622 375 PANTHER SUGAR KINASE 66 374 - -
Ahy18g1622 375 Gene3D - 66 374 IPR029056 -
Ahy18g1622 375 PRINTS Ribokinase signature 241 256 IPR002139 GO:0016301
Ahy18g1622 375 PRINTS Ribokinase signature 171 184 IPR002139 GO:0016301
Ahy18g1622 375 PRINTS Ribokinase signature 98 117 IPR002139 GO:0016301
Ahy18g1622 375 PRINTS Ribokinase signature 71 92 IPR002139 GO:0016301
Ahy18g1622 375 PRINTS Ribokinase signature 285 296 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1622 Ahy-Chr18 38890351 38893584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1622 K00852 - fve:101295116 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1622 18 38890351 38893584 Ahy18g1622 18 38890351 38893584 ECH