Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1570 ATGGCATTCACATTGTGGCTTGTTCCTCTTACACTACTAGCCTCTTATACTTTTGTGGTGGCAGTGGCAATTCCACAATCACCAAACCAAAAAGTGATTCAGAACAAGGTGGAAGGGTGTGATCTTTATGAAGGCAAATGGGTCATTGATGAATTTTATCCTCTACATAATGCTTCAAGCGATTGCTCTTTCATTGCTAAGGGATTTGATTGTGTTAGAAATGGAAGGCCTGATAAAAAGTACCTCAAGTATAGATGGAAGCCCAATGCTTGTGACCTTCCAAGGTTTGATGGTGAAAAGTTTTTGGAGAGAAACAAAGGAAAGAAGATAATGTTTGTTGGGGACTCAATAAGCAACAACATGTGGCAGTCACTCACATGTTTACTTCACAAGACTGTTCCAAACTCAAACTACACCTTAACTAGACAAAGTTTGCTCTCTATTTTCTCATTTCCGGAATATGAAGCGTCAATCATGTGGCTGAAAAATGGGTTTCTTGTGGATTTGATAAATGACAAAGAAAAAGGTGGGATTCTAAAGTTGGACAGCATTAGCACTGGGGGACAGTGGAAAGAAGTAGACATTTTGATTTTCAATAGCTATCATTGGTGGACTCATACAGGACACTCTCAAACATGGGATTATTTTCAAGTGGGTGATAAGTTGATCAAGGACATGGATCATATGGAAGCTTTCAAGATTGCATTAACCACTTGGGCAAAATGGATAGATTCTAACATTGATCCTTCAAAGATTAGAGTCTTTTTTCAAGGAATTTCTGCTTCCCATGCTGATGAGAAGGCATGCTTGAGAAAAACTCAACCAGAGGAAGGATCAATGGCACCACCATATCCAGGTGTGGACATAGTGAAGAGTGTTATAAACAACATGACAAAACCAGTGGAACTGCTTGATATTACTTTGCTAACACAACTAAGAATAGATGGTCACCCTTCAATTTATACAGGAAGTGGTCCTTCTTTTGTTGATTGCAGTCATTGGTGTCTTGCCGGTGCTCCTGATTCTTGGAATGAGATTTTTTATGCTACTCTACTTAGAGATTAA 1065 0.3897 MAFTLWLVPLTLLASYTFVVAVAIPQSPNQKVIQNKVEGCDLYEGKWVIDEFYPLHNASSDCSFIAKGFDCVRNGRPDKKYLKYRWKPNACDLPRFDGEKFLERNKGKKIMFVGDSISNNMWQSLTCLLHKTVPNSNYTLTRQSLLSIFSFPEYEASIMWLKNGFLVDLINDKEKGGILKLDSISTGGQWKEVDILIFNSYHWWTHTGHSQTWDYFQVGDKLIKDMDHMEAFKIALTTWAKWIDSNIDPSKIRVFFQGISASHADEKACLRKTQPEEGSMAPPYPGVDIVKSVINNMTKPVELLDITLLTQLRIDGHPSIYTGSGPSFVDCSHWCLAGAPDSWNEIFYATLLRD* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1570 354 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 14 352 - -
Ahy18g1570 354 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 93 349 IPR026057 GO:0016740
Ahy18g1570 354 Pfam PMR5 N terminal Domain 39 92 IPR025846 -
Ahy18g1570 354 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 352 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1570 Ahy-Chr18 35254452 35258819 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1570 - - gmx:100793795 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1570 18 35254452 35258819 Ahy7g2021 7 76805495 76809230 hybridization
Ahy18g1570 18 35254452 35258819 Ahy13g1886 13 31849911 31853165 PCT
Ahy13g1886 13 31849911 31853165 Ahy18g1570 18 35254452 35258819 PCT