Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1504 ATGGCGCAAACCCAAACCCTAGCTTTGGTCGAAGAGATCGAATCCCTCGTCTCCGATAAACTTCAAGTGGTTTCATATAAGTGGCTCAGTCGCAATTACATGATATCTTCCAATGAGGCAAAGAGGTTGCTTCAGGAGTTTGTTGAAAAGCATGATGGTGGATTGGAGGTTGTTTATGCTTTGTCTGGCTGGTTAAAGGGCAGCCACCCAAGTTACCACATAAGGCTTGTTACTGGCCCAAAGCTAGCAGAAGCACAGCAAGAATTTGATGGCAATTGCTCAATTCAGGTATACAGTGTGCAAGCTAGCATCCCAAAGGACCCGGCTGTGCTTTGGAATGCAGAATTTATTCAAGCGGAGGAGCTCTTCAAGCAGCCATGGTCAGTTGACAATTGCTTGAGAGATAACAGGTTCTGTGGCATATCTAGTTCTTTTGTTCAACGAAATGTAGATGGCATGCCAGTGGTTGCTGCAACTCCACTGACAAAAGCTTCAGTAGGCATAGGACAAACAAAGATGAATGTTCTGCAACCTCAAAAAAATATAGCACACGATACAATTCCCAGAGCTGATCTCAAGTCAGAGGATGTGGTGAAAGATGTAAAGAGTGAAAGCAATGGTACAGGGAGTACAGGAGTTCATGATCAGGTTAACAAACCCAGTGAAGACAAAGAAAAGGTAGTGCCTGCAGGAAAAAAGAAAGCACAATCTGATAAAAGTGGTTCTTCTACTGGTGGTTCATTGGCAAGCTTTTGGGGTCGTGCATCTGCAAAACCCAAGCCTAGCTCCCTGCCAGTAGAAAGTAGTAACGCAGTTTCGAATCATAGTGCTACTGAAGATGCCCAAGCTAGCGCTCGTGAAGCAGATGGCAGTGGTGATGATGATAATCAAGATGTCACAGTAAGGCGATCATCCAATAGGAAAAGGAGGGTTGTCTTTGACTTCTCGGATGAAGATGAAGATGTTGTCAGTTTATCATCACCAGAATTGCCAAAGAAGCAATCATCTCAAGATTCTAAACAAAAGGATAACAAGTCATCGGAGAAAGCCACCTTAAATTCTGATACAAAGAGAGAAAATAAACCAATGGCTAAGGAAGAAAAATCATCTGATGAAAAAGCCAACCAACCTTTCCAGGAAGAGTTATCGGTTATCAACAAATGCACAAATAATGGTAAATCATCTAGTGAGAAGCCACAGAGTTGTGCTCCTGATATTTCTGTTAATAAAGATAGTACAAAGAATGCTGCACCTGGTTCACCGAAGAGGAGAAAAGTGATGAAGACCAGAATTGATGAACGAGGGAGAGAAGTAACTGAAGTAGTCTGGGAAGGGGAGGAAACAGAAGCGAAGAAAGCTGATAAGGTTGCAACAAAGAAATCTGAGAATAATGTATCTACCAATTCTGTCAACAGTGGCCCGGCAACTAAGAAGACTCCAGCTGTGGTGAATACCACTGGAAAAGGAAGCAAGAAAACGGTAAACAAGGATCCCAAACAGGGCAATATACTTTCATTCTTCAAGAGAGTTTGA 1533 0.4266 MAQTQTLALVEEIESLVSDKLQVVSYKWLSRNYMISSNEAKRLLQEFVEKHDGGLEVVYALSGWLKGSHPSYHIRLVTGPKLAEAQQEFDGNCSIQVYSVQASIPKDPAVLWNAEFIQAEELFKQPWSVDNCLRDNRFCGISSSFVQRNVDGMPVVAATPLTKASVGIGQTKMNVLQPQKNIAHDTIPRADLKSEDVVKDVKSESNGTGSTGVHDQVNKPSEDKEKVVPAGKKKAQSDKSGSSTGGSLASFWGRASAKPKPSSLPVESSNAVSNHSATEDAQASAREADGSGDDDNQDVTVRRSSNRKRRVVFDFSDEDEDVVSLSSPELPKKQSSQDSKQKDNKSSEKATLNSDTKRENKPMAKEEKSSDEKANQPFQEELSVINKCTNNGKSSSEKPQSCAPDISVNKDSTKNAAPGSPKRRKVMKTRIDERGREVTEVVWEGEETEAKKADKVATKKSENNVSTNSVNSGPATKKTPAVVNTTGKGSKKTVNKDPKQGNILSFFKRV* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1504 510 MobiDBLite consensus disorder prediction 217 233 - -
Ahy18g1504 510 MobiDBLite consensus disorder prediction 262 281 - -
Ahy18g1504 510 MobiDBLite consensus disorder prediction 454 510 - -
Ahy18g1504 510 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 6 146 IPR041913 -
Ahy18g1504 510 MobiDBLite consensus disorder prediction 376 416 - -
Ahy18g1504 510 MobiDBLite consensus disorder prediction 186 202 - -
Ahy18g1504 510 MobiDBLite consensus disorder prediction 286 317 - -
Ahy18g1504 510 MobiDBLite consensus disorder prediction 460 500 - -
Ahy18g1504 510 Pfam DNA polymerase subunit Cdc27 23 509 IPR019038 GO:0005634|GO:0006260|GO:0043625
Ahy18g1504 510 MobiDBLite consensus disorder prediction 236 250 - -
Ahy18g1504 510 MobiDBLite consensus disorder prediction 179 426 - -
Ahy18g1504 510 MobiDBLite consensus disorder prediction 335 375 - -
Ahy18g1504 510 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 509 IPR019038 GO:0005634|GO:0006260|GO:0043625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1504 Ahy-Chr18 30965035 30969351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1504 K03504 - gmx:100812372 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1504 18 30965035 30969351 Ahy18g1504 18 30965035 30969351 ECH
Ahy18g1504 18 30965035 30969351 Ahy7g2065 7 78093072 78097175 hybridization