Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1503 ATGGGTTGTGCTGGATCCTCACAGTCCAAGCCTGATGGGGCAATGAAAAAGATCCGGAAGCCTAAGCCTTGGAAGCATCCTCAGCCAATAACAAAGACTCAGCTAATACAACTGCGCGATGAGTTCTGGGACACAGCTCCCCACTACGGTGGCCGTAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCTGAGGCTGATCTAACTTTAGCACAAGCGATTGTGGATAGTGCCGGGGTTATTGTCCAGAGTTCGGATTTGACAGTATGCTATGACGAAAGAGGAGCAAAGTATGAGCTACCAAAGTATGTATTGAGTGAGCCAACTAACCTGATTCGGGACAGTTAA 345 0.4841 MGCAGSSQSKPDGAMKKIRKPKPWKHPQPITKTQLIQLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDS* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1503 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 111 IPR039869 -
Ahy18g1503 114 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 111 - -
Ahy18g1503 114 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
Ahy18g1503 114 Gene3D - 31 104 IPR038169 -
Ahy18g1503 114 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1503 Ahy-Chr18 30960203 30964436 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1503 - - gmx:100306399 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1503 18 30960203 30964436 Ahy18g1503 18 30960203 30964436 ECH
Ahy18g1503 18 30960203 30964436 Ahy7g2066 7 78097946 78102103 hybridization