Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1501 ATGAGGAGGAACAGTGTTCTGTTATTGTATTCTCTCATTGCGCTTGCCGCTTACTTCTCTCTCCGATTTCAAGCTCAAGCTGCTCCTGCAGGGCCATTGATTAACCATCTTTCTTCACTTCTCAAATGGACAAGGTCTAGTGCCTCCAAGACGCCAAATTCAGATGGGAGTGTTCTTCAATTTGAGAATGGCTATGTTGTTGAGACTGTTGTGGAAGGAAATGAAATTGGGGTCATTCCTCATAGGATCCGTGTGTCTGAGGAAGATGGCGAACTCTATGCTGTAGATGCAACCAATAGCAACATTGTTAAAATTACCCCGCCATTGTCGCAATATAGTAGAGGAAGATTGGTGGCTGGATCATTTCAGGGTCACACTGGTCATGTGGATGGAAAGCCAAGTGATGCTCGTTTTAATCATCCCAAAGGCATAACCATGGATGATAAAGGGAATGTTTATGTTGCTGACACTCAGAATATGGCCATCAGAAAGATCGGCGATGCTGGTGTGACAACCATCGCTGGTGGGAAGTCAACTGTTGCAGGCTATAGAGATGGACCAAGTGAGGATGCTAAATTCTCAAATGATTTTGATGTTATATACGTTAGGCCCACCTGTTCTTTGTTGGTCATTGATAGAGGAAATGCTGCTCTTCGGCAAATCTCCCTTGAACAGGAGGATTGTGATTCTCAATCAAATTCAGTTTCCAGTACAGATATCCTTACAGTTGTTGGTGCTATCATATTGGGATATGCGACGTGCATGCTACAGCAGGGATTCGGTCCTTCGTTCTTCTCCAAAACTGTAGTATCTCGACCGTTGGAAGGAGAGTTCAAAGCGCACGCAAGCCATGAGAAAACCATGCCGATCCTGGAGAACGCTAAAGAGGAGCCAGGATGGCCATCTTTTGGACAACTTCTTGTTGATCTTTCTAAGCTATCCCTTGAAGCATTGGCTGGTGCATTCACTCAATTCATACCCTCGCGTCTCAAATCGAACGGCCCCACGAGAAGCCTAACACCACTGAAAGATCGTCTCAAGATGCCTGAAGATGAAGTGCAGCAACCTCCCTTGGTCAATAGGCAAAGTGCTCCAGCTCCTGCTCCTCTTACTGGAACTCGGCATCCTGCTACTCCTACAGAACCTCGGCAGGTCCATACTTCAAGCACAGCTGAGAAACACTCAGAAATGAAGCCCCGGAAGATAAAATCAAGCAGTTCCAAGGATCCCTCTTTGTCAAGTAAGCATCATTCATCGTCTAAACGAGCCGAGTATGCTGAATTCTACGGATCAACTGAAATCCCACCGTACACTAAATCTAAGGTCCCGAAAGAAAGGCCAAGACATAGGTCACGAGAAAAGAGCGGAGAAGTTGTTTACGGAGCAGTCAGGGCTGAGCCAAAACCGGCCGAGACAAGGACCGTTGATTACAACAATCCCAAGTTTGATCACTACAGTATGAGGACTAAGTATGCATCTGGGGAAGCCTTCCGCTTCAACTCTCAGTAG 1509 0.4619 MRRNSVLLLYSLIALAAYFSLRFQAQAAPAGPLINHLSSLLKWTRSSASKTPNSDGSVLQFENGYVVETVVEGNEIGVIPHRIRVSEEDGELYAVDATNSNIVKITPPLSQYSRGRLVAGSFQGHTGHVDGKPSDARFNHPKGITMDDKGNVYVADTQNMAIRKIGDAGVTTIAGGKSTVAGYRDGPSEDAKFSNDFDVIYVRPTCSLLVIDRGNAALRQISLEQEDCDSQSNSVSSTDILTVVGAIILGYATCMLQQGFGPSFFSKTVVSRPLEGEFKAHASHEKTMPILENAKEEPGWPSFGQLLVDLSKLSLEALAGAFTQFIPSRLKSNGPTRSLTPLKDRLKMPEDEVQQPPLVNRQSAPAPAPLTGTRHPATPTEPRQVHTSSTAEKHSEMKPRKIKSSSSKDPSLSSKHHSSSKRAEYAEFYGSTEIPPYTKSKVPKERPRHRSREKSGEVVYGAVRAEPKPAETRTVDYNNPKFDHYSMRTKYASGEAFRFNSQ* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1501 502 MobiDBLite consensus disorder prediction 387 405 - -
Ahy18g1501 502 PANTHER NHL DOMAIN-CONTAINING PROTEIN 15 499 - -
Ahy18g1501 502 Pfam NHL repeat 138 164 IPR001258 GO:0005515
Ahy18g1501 502 MobiDBLite consensus disorder prediction 352 465 - -
Ahy18g1501 502 Gene3D - 38 223 IPR011042 -
Ahy18g1501 502 PANTHER - 15 499 - -
Ahy18g1501 502 SUPERFAMILY NHL repeat 66 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1501 Ahy-Chr18 30892562 30896157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1501 - - gmx:100797841 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1501 18 30892562 30896157 Ahy18g1501 18 30892562 30896157 ECH
Ahy18g1501 18 30892562 30896157 Ahy7g2068 7 78136257 78139998 hybridization