Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1440 ATGGCTCCATCTCTCACTTCCCGCCACGTCTTGCTCCCCCTCACCGTCCTCGTCATCCTCTGCGCTCACGCCCACGCTGTTCGCTTCTTCTCGCACTCTTTACCTTCTTCCGATCTGCTTTCTGATGGTCTTCCAGAACCTTCTTCTTCTGATGAGAAGGGGAGCCTCATTCGGCTTCCGACAGCGTCATCATTCAGGTTCCTGCGTGCTGCTGAATCCAAGTGCGAGCAGACGTACGGGTTCTTACCGTGCACCACCACGGTGCTTGGGAACTTGTTCTTGATCATAGTTTATGGCTTCCTTATGTACACCGCTGCTACCTACTTGTCCACTGGGAGTGAGCTCTTGCTTGAGATCTTGGGCCCTGGAATCGTTGGTGGCTTGTTCCTTCCAATTCTTGGTGCTTTACCTGATGCCATGCTCATTCTCGTGTCTGGGCTTTCAGGTAGTAAAGAAACTGCTCAAGACCAGGTCTCTGTTGGAATGGGCCTGCTAGCTGGGTCAACTGTGCTGCTTCTGACTATAATATGGGGTACCTGCGTAATTGTCGGCAAGTGTGATCTGGTGAATTCAGTTGCATTGGATTCAGTAGACACGCGGGGATACAGTTTAACTGGTTCTGGTGTTAGTACCGACATTTGGACCAGTTACGCAGCAAGGATTATGATTATATCTGTACTTCCGTTTTTGATTGTTCAATTACCACAACTTCTCCATTCATCATCAGGAAGGCACTTGGCTGTTTTGATTGCTCTTATTGTCTCTTTGTTGTTACTAGCTTCTTATTGCTTTTATCAGGTTTTCCAACCCTGGATACAGAGGAGGAAACTTGAATATGTTAGGCACAAGCATGTTATTCTAGGACTTTTGAGACATTTGAAGCAGCGTGCATTGGGAAGGCTGCTCAAAGAAAACGGTGAACCTGACAGAGAAATTATTAGAAAGTTGTTTACAACAATCGATGAAAACAGTGATGGGAATCTTACTCATGGTGAATTGAGGGCACTAGTTGTTGGAATTCAATTTGAGGAAGTTGACCTGGATCATGATGATGCCGTAAAAAGAATAATGAATGACTTTGATACTTCACGCAATGAACTTGTAGATGAAGAAGAATTTGTTAATGGCGTCTGTAGATGGCTTGACAGAGCCAGGGGTTCTCGACCTGCGTCTGGTGATGCTGGCCCCCACACAGTGAAATTTTTAAGCAATTTTCACAATGAAACAAAGAGGGAACATGATCTCCTGGATGTGAGTGGTCAAAATGAAGAAGTTTCTGAAGGTGTTGAGAAATCAAAATGGACTACAGTCAAGTCATTGCTGTTTTTATTACTGGGAACTGTTATCGCTGCTGCATTCGCTGATCCTCTGGTTGATGCAGTCGACAACTTTTCCGATGCTACAAGTATTCCTGCTTTCTTCATTTCTTTTATTGCTCTGCCTTTGGCAACCAATTCAAGCGAAGCAGTTTCGGCAATTATTTTCGCTAGTCGCGATAAGAGACAAACTGCCTCATTAACATTTTCAGAGATATATGGTGCAGTGACAATGAACAATGTGCTATGCCTATCAGTGTTCTTAGCATTGGTCTATGTAAGAGGATTGACATGGGATTTCTCTTCAGAAGTTTTGGTGATTCTTGTTGTTTGCATTGTGATGGGTGTACTTGGCAGCTTCCGTACATGCTTCCCTCTATGGACAGCCATAATAGCTATCCTCCTTTACCCTTTCACCCTGGCATTAGTCTATGTTCTTGATTATGTCTTTGGTTGGTCATAG 1779 0.4441 MAPSLTSRHVLLPLTVLVILCAHAHAVRFFSHSLPSSDLLSDGLPEPSSSDEKGSLIRLPTASSFRFLRAAESKCEQTYGFLPCTTTVLGNLFLIIVYGFLMYTAATYLSTGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSKETAQDQVSVGMGLLAGSTVLLLTIIWGTCVIVGKCDLVNSVALDSVDTRGYSLTGSGVSTDIWTSYAARIMIISVLPFLIVQLPQLLHSSSGRHLAVLIALIVSLLLLASYCFYQVFQPWIQRRKLEYVRHKHVILGLLRHLKQRALGRLLKENGEPDREIIRKLFTTIDENSDGNLTHGELRALVVGIQFEEVDLDHDDAVKRIMNDFDTSRNELVDEEEFVNGVCRWLDRARGSRPASGDAGPHTVKFLSNFHNETKREHDLLDVSGQNEEVSEGVEKSKWTTVKSLLFLLLGTVIAAAFADPLVDAVDNFSDATSIPAFFISFIALPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILVVCIVMGVLGSFRTCFPLWTAIIAILLYPFTLALVYVLDYVFGWS* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1440 592 Gene3D - 265 387 - -
Ahy18g1440 592 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 589 IPR004713 GO:0006812|GO:0008324|GO:0016021
Ahy18g1440 592 SMART efh_1 352 380 IPR002048 GO:0005509
Ahy18g1440 592 SMART efh_1 312 340 IPR002048 GO:0005509
Ahy18g1440 592 ProSiteProfiles EF-hand calcium-binding domain profile. 308 343 IPR002048 GO:0005509
Ahy18g1440 592 PANTHER SODIUM/CALCIUM EXCHANGER NCL 16 589 - -
Ahy18g1440 592 Pfam Sodium/calcium exchanger protein 439 583 IPR004837 GO:0016021|GO:0055085
Ahy18g1440 592 Pfam Sodium/calcium exchanger protein 93 269 IPR004837 GO:0016021|GO:0055085
Ahy18g1440 592 SUPERFAMILY EF-hand 307 380 IPR011992 -
Ahy18g1440 592 ProSitePatterns EF-hand calcium-binding domain. 321 333 IPR018247 -
Ahy18g1440 592 CDD EFh 313 377 IPR002048 GO:0005509
Ahy18g1440 592 Pfam EF-hand domain pair 313 375 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1440 Ahy-Chr18 27791245 27796579 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1440 28 592 EF-hand Containing Proteins AT1G53210 67.019 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1440 - - adu:107459761 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1440 18 27791245 27796579 Ahy18g1440 18 27791245 27796579 ECH
Ahy18g1440 18 27791245 27796579 Ahy7g2117 7 79441111 79446394 hybridization