Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1421 ATGGATGGCAATGTTTTATTCGATGAAGGCAACAACGAAGAAGCCAACAACAATAATAATGGCACTATCAGCAACTCCAAGGACCGGAAGAGGAGAGACTACATGCTTGATGATGATAGCCCCAAGGTGGCACGCCAAAAACTTGCCAAGAGGATCCTCTTGTCTTTGACTAACCCTTCTTATGTTCTGAGACTTGGTTCCAAACCTCTGAGGTTGGATTACTGCACAAGGTTGCGGTACCTGCTGAGGAAGCTTGTCAAGGAACATGACTGGGCCACTGCCAGTGGTGTTCTCAGTGCTTACTTAAAGGGAACAATGAACGACAAGTCTCCATTCAGGAATTGCCTCAAGTTCTCGGCTTTATTGGAGCTTCTTAAGCACGTGGAAAACTATCATATTAATCCAACAAGGATGAAGAACCTCTTTGATATTTGGTCGAAGAATATTGGATCAATGAAGAGTTGGCCAATAGAAAGCAGATATAGAGTTCATGTGGAGTTCATCTTATTCTGTCTTGTGCATGGCAATACTGGGGATGCATATCAGCTTGTCATAAGCCTTGAGCAAGAAAAAGTTGATCTTGATCCTGTGTCAAAGATAATTATGGGCTTGACATTCTATACGATGTGGTATTCTTCTATCCCCGAAGAATTTCAGTGGAAAGATTCAGACCAGGCTGACTTGCAAGATTACTCACGTATGGAGGGGCCTTCCATCAGCAATGAAGTTGGACAGTCAGAGTGGCATAATACAGTTGAATCCTTTCTGGCAAACTCCCAAAGCCATTGTGAATCAGACACCTCTGTTTTGAAGGATAAGCATATATCTAGGGATGTTGGGTTCAACAATGACGTGGGAGAGTCTATGGAGATTGATGTTGATCATAGAAGAAAAGCATCGCATCAGAACTTACAGCCAGAAGAAGGTTTTCGCTCTAAGTCCGAAGAAAATGAAGGAAGTAGAGACTCCTTTTCCAACCATGAAGGCCTTACACAAGATACCTTAAATGTTATTAGGCAACTTGATTTGTGGTTGTTTCCCTTGAATTTTCCTGATGATAATAGTTTTGAGGAGTTCATGTATGTGCACTCAAATCAGCAAAATGACCAGTATAAAAAGGCTGTGAAATATTTACAACTTGCTCTCGACTCAGCACCTTCAGTAACAGCAGCATTACTTCCATTGATACAACTGTTGTTGATTGGAGGTCGTGTTGAAGAAGCCCTAATTTTGATTGAGAAGGAGTGTACTAATTCACCATCTGTGCTCCCTGTAAGATTGAGGGCTGCGTTCTTGGAGTGTTCTGATCGAAACAACTCTGACTTGATTGTCACATGTTTTGAGGATATGCTAAAGAAGGATCCACAAGAAAGTTATCCCTTAGCAAAACTTATCAGAATGTACCAAAACGGTGACTATAGCCTTGAATCTTTGTTCGAAATGATTGTTTTACATTTAGATGCTACTAGTGCAGAATACAGTACGTGGAGGATGTTATCTTCATGTTTCTTTAAACTCTCTTACTACGAAGAAGATTGTATATCTGCAAACGATACTAATGAAGATGGAGATAGGCAACATTATTCCTTTAGAAAAACCCCAAAAGTGTTTACACAGGAAATGTCCGGAATGTCTTGGAGGTTTCGCTGTAGGAGCTGGCTACTAACACATTTCAGCCATAGACAGCTTAATTCAGATGTTGAAGGTGATTTGCAGCTACTCACATACAAAGCAGCATGCGCATCCTATATGTATGGGCAAGATTTCCACTATGTTTTAAAGGCTTATTTTGTATTAGAAAATGAAAATAATAAGGACTTATTGTTGATTTTGGGTGAGCACAGGCAAAATTCATTTGAATTTTATCAGCAATTTCAAAATAAACTGAAATTATAA 1896 0.3987 MDGNVLFDEGNNEEANNNNNGTISNSKDRKRRDYMLDDDSPKVARQKLAKRILLSLTNPSYVLRLGSKPLRLDYCTRLRYLLRKLVKEHDWATASGVLSAYLKGTMNDKSPFRNCLKFSALLELLKHVENYHINPTRMKNLFDIWSKNIGSMKSWPIESRYRVHVEFILFCLVHGNTGDAYQLVISLEQEKVDLDPVSKIIMGLTFYTMWYSSIPEEFQWKDSDQADLQDYSRMEGPSISNEVGQSEWHNTVESFLANSQSHCESDTSVLKDKHISRDVGFNNDVGESMEIDVDHRRKASHQNLQPEEGFRSKSEENEGSRDSFSNHEGLTQDTLNVIRQLDLWLFPLNFPDDNSFEEFMYVHSNQQNDQYKKAVKYLQLALDSAPSVTAALLPLIQLLLIGGRVEEALILIEKECTNSPSVLPVRLRAAFLECSDRNNSDLIVTCFEDMLKKDPQESYPLAKLIRMYQNGDYSLESLFEMIVLHLDATSAEYSTWRMLSSCFFKLSYYEEDCISANDTNEDGDRQHYSFRKTPKVFTQEMSGMSWRFRCRSWLLTHFSHRQLNSDVEGDLQLLTYKAACASYMYGQDFHYVLKAYFVLENENNKDLLLILGEHRQNSFEFYQQFQNKLKL* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1421 631 MobiDBLite consensus disorder prediction 295 328 - -
Ahy18g1421 631 MobiDBLite consensus disorder prediction 295 323 - -
Ahy18g1421 631 Gene3D Tetratricopeptide repeat domain 355 513 IPR011990 GO:0005515
Ahy18g1421 631 PANTHER TAF RNA POLYMERASE I SUBUNIT A 16 628 - -
Ahy18g1421 631 Pfam TAF RNA Polymerase I subunit A 84 596 IPR039495 GO:0000120|GO:0006360
Ahy18g1421 631 MobiDBLite consensus disorder prediction 1 32 - -
Ahy18g1421 631 SUPERFAMILY TPR-like 366 469 IPR011990 GO:0005515
Ahy18g1421 631 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1421 Ahy-Chr18 27243773 27255054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1421 - - gmx:100819662 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1421 18 27243773 27255054 Ahy18g1421 18 27243773 27255054 ECH
Ahy18g1421 18 27243773 27255054 Ahy7g2125 7 79638656 79651145 hybridization