Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1408 ATGGAGACAGAAAGACCCCATAGGAGTAATAGCAATAGTAGCAGCAGCACAAGCGAGCTCTTTGTATGCTTCACTTCAAGGCTATCTTCTTCATCAATGAAGCTCTCTTCCAAGTCACTCCTCAGCCCAAGCAGAACCAGCAGAGACCCTCCTCCTCAGATTTCTCTGTCTTCTTCCCTCAGCAGAAGGCTCAGAAGCAATGGAAGCATCAAAGGAGGTGGCCAAGCTTCTCCAATGTTCCCAGCAACAGCAACTGTGGGAGGGAAGAGAAGAGGGTGTGGGTTTGAGAACCCTGAACCTTCTTCACCTAAAGTCACTTGCATTGGACAAGTGAGAGTGAAGACAAAGAAGCAAGGGAAGAAGATGAGGGTCACAAGGTCAAAGTCAAAGAGAAGAACTACAACAACAAGTGAAGCTAGCTTCAGAAGAACATCAACAGAAGGTGGAGGACAAATAACAAACTCTTCAGATCTCACGAGGCAGAATAGTTCTTCTTCTGCTACATACTTGAAGCAGCAGCATAGGAATAACCAGAAATGGGTTCATCTTCCATTGACCATTTGTGAGGCTCTTAGGGAGTTCAATTGCTTCTTCCCATGTAGGTCTTCTTGCATGAGAGACAAAGGGGACAAAGGGAATCATCATCATGACCATCATCATCATCATCATGGTGGAAGAGAGGGTTCATCATGTGGTGCTGCTTTTGCAAGGTGGCTGCATTTGGCTTTGCAAGAAGGGAAGGAGAGGGAGATTGAGGTGGTGATGGGTGAGGAGGAGAATGAGGTTGAAGATTATGATCATGATGATGATGGTGGTGGTGGTGATTTCGGTGGGAGGAGCCATAGGAGGCACGTGTTTGAGGACATTGACATTGATGTTGTGGAAGGGAAGAAGGAAGAGAAAGAAGAAGAGGAAGAAGAAGAGAAAGGAAGGGTTAGCATTTGTATTCCACCGAAGAACGCTTTATTGCTTATGAGGTGCAGATCTGATCCTGTTAAGATGGCAGCTTTGGCCAACAGGTTCTGGGATTCACCTGTTCACAAAGACCAACATCAACATCAAGATGATGAGGAGGAGGAAGAAGTAGCAGAAGAGGAGGAGGAGAATAATGTTGATGATGATGTAGATAAGCAAGAACGAGAACCTGAACAAGAAGTTGAAATGGAGGAAGGCGAGGAAGTGCTAATGAAAACTGAAGAAGAAAGGATTAGCATTTCTGAAAGAGAAACAGAAGCTGGTTTTGTGAACATTGAAGAACACAACCAAGCATCATCACTTATGGAGCAGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTAGTAGCGGTGCAGGAAAGTTGCGAAATTGAAAGCAGAACAAACGCAGAATTCAGTGAAGAAGCTCGTGAAAGCAATAATCAGCACACCGAAGAAGGAGAAGAAACAGAAACAGAGCAAGTTGAAGTTGAAAACGAAGAAGAAGAAAATCACAATCAAGATGGAAACTTTTCATGCGTTTCAACCCTAGAACCCCATCCAGATCTCGATAAACCGGAAGAAACTAGTCTTCAAGAGGAAAAGAAACAAGAAAACGACGAAAGCTCAGAACTTTATTCCATTGCAGAAACCCTTACAGCTCCGCAACAAAACGACGAAGCAGAACCCAAAACGACAACAATGCCTGAACCATTAACAGATGAAGAAGCTTCAACAGAAGAGGAGCAACAACAGAACGTGGCCGCAGAAACACCGCCGCCGCAACTGCCGGAAGTAACACCTCCGGCGAACGAAGCATCTGAGCCAAACAACGGACTCGGGTCAGAGGAGCGAAAAATCGGGTCAAACGGCGAGGAGAAAGAAGCAGAATTAGAAAGAGAAAAGGAAGAAACGTTACCGGAATGCTTGCTTCTGATGATGTGCGAGCCGAAGCTTTCAATGGAGGTATCGAAGGAGACGTGGGTTTGCAGCACCGATTTCATACGCTGGAGACCGGAGAGACCTGTCGGAAAAAATTCCGGCGCCGGACGGAAGGTCCACGCGGCGGTGGAAGGCAGAAATAGCGTCGATAAGAAAGCAAGCGCTGCGGCTCCGCTGCCGCCAGTACAGCCGGGACGGTCGTCGTGCTCGTTCCCGGCAGCGCCTGGATTGTCGATGGCGGCGATGATTGAACAGAAGTTGGCAGCTGGACCGAAATCCAACGCTGGCTACGAGCCATTTGTGCTCACGCGCTGCAAGTCGGAGCCGATGAGGACGACGGCAAAGCTCGCAGCCGATGCGTGCTTCTGGAAGAAGCCCCACGCACCGCCGCCAACACTCGGAGTTGGAGCACCCGCCGGGGTTGGATTTTGA 2364 0.4772 METERPHRSNSNSSSSTSELFVCFTSRLSSSSMKLSSKSLLSPSRTSRDPPPQISLSSSLSRRLRSNGSIKGGGQASPMFPATATVGGKRRGCGFENPEPSSPKVTCIGQVRVKTKKQGKKMRVTRSKSKRRTTTTSEASFRRTSTEGGGQITNSSDLTRQNSSSSATYLKQQHRNNQKWVHLPLTICEALREFNCFFPCRSSCMRDKGDKGNHHHDHHHHHHGGREGSSCGAAFARWLHLALQEGKEREIEVVMGEEENEVEDYDHDDDGGGGDFGGRSHRRHVFEDIDIDVVEGKKEEKEEEEEEEKGRVSICIPPKNALLLMRCRSDPVKMAALANRFWDSPVHKDQHQHQDDEEEEEVAEEEEENNVDDDVDKQEREPEQEVEMEEGEEVLMKTEEERISISERETEAGFVNIEEHNQASSLMEQPEEEEEEEEEEEEEEEEEEEEEVVAVQESCEIESRTNAEFSEEARESNNQHTEEGEETETEQVEVENEEEENHNQDGNFSCVSTLEPHPDLDKPEETSLQEEKKQENDESSELYSIAETLTAPQQNDEAEPKTTTMPEPLTDEEASTEEEQQQNVAAETPPPQLPEVTPPANEASEPNNGLGSEERKIGSNGEEKEAELEREKEETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRWRPERPVGKNSGAGRKVHAAVEGRNSVDKKASAAAPLPPVQPGRSSCSFPAAPGLSMAAMIEQKLAAGPKSNAGYEPFVLTRCKSEPMRTTAKLAADACFWKKPHAPPPTLGVGAPAGVGF* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1408 787 MobiDBLite consensus disorder prediction 541 561 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 345 634 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 29 85 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 689 711 - -
Ahy18g1408 787 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 787 - -
Ahy18g1408 787 Coils Coil 426 458 - -
Ahy18g1408 787 Coils Coil 291 311 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 208 228 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 517 540 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 356 374 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 116 130 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 486 500 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 29 73 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 138 171 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 616 634 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 428 456 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 395 415 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 464 485 - -
Ahy18g1408 787 PANTHER CHLOROPLAST PROTEIN HCF243 1 787 - -
Ahy18g1408 787 Coils Coil 470 497 - -
Ahy18g1408 787 Coils Coil 348 368 - -
Ahy18g1408 787 MobiDBLite consensus disorder prediction 116 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1408 Ahy-Chr18 26859396 26862485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1408 - - ahf:112770755 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1408 18 26859396 26862485 Ahy18g1408 18 26859396 26862485 ECH
Ahy18g1408 18 26859396 26862485 Ahy8g2017 8 40242275 40245348 hybridization