Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1373 ATGTTAGGAAGTAATAACAAAAGTTCCCATGGCACTGCAGCAACAACAACACCTCTCTTATTAGGTGATAGAGAAGAAGTAGAAGATGCACAGCAACAAGAACAACATGAAGAATGGTGGAAGAGAATCTTGGATATGGATGAGGCAAAGCATCAACTACTGTTTTCACTGCCCATGATTGTTACAAACTTGTTGTATTACTTAATCACTTTGGTTTCAGTAATGCTTGTTGGTCACCTTGGTGACCTTCAGCTTGCTGGTTCCACTCTTGCCAACTCATGGTTCAGTGTCACTGGTGTCTCTCTCATGGTTGGTTTGAGTGGGGCACTAGAAACACTATGTGGGCAAGGATTTGGTGCAAAAGAATATCAAATGCTGGGAATTTATCTACAATCTTCATGCATCATATCCTTTGTTTTCTCCATCATCATATCCATAATTTGGTTCTACACACAACATATCTTAGTACTACTTCACCAATCCCAAGACATATCAAAAACAGCAGCACTCTACATGAAGTTCTTTTTTCCAGGCTTATTTGCATATGGATTCTTGCAAAACATTCTTAGGTTTCTCCAAACACAATCTGTTGTGACACCATTGGTTATTCTCTCAGCTATCCCATTGTTGATCCACATTGGTATTGCATATACATTGGTTGAGAAGACAGGTTTGGGTTTTGTTGGTGCACCTATTTCAGCTTCAATTTCACTATGGATAGCTATTGTTTTGTTGGCTTTGTATGTTATGTATGGAAAGAACTTCAAGTTGACATGGGAAGGGTTTTCTACTCAATCTTTTCATTATGTATTCCCTAGCCTTAAACTTGCTCTGCCCTCTGCAGCAATGGTATGTTTGGAGTATTGGGCTTTTGAAGTCTTGGTTTTCTTAGCTGGAATAATGCCTGATTCAGAAATAACCACTTCCTTGATTGCAATATGTGCCAATACAGAATTCATTGCATACATGATAACTTATGGTCTCAGTGCTGCTGCAAGCACCCGAGTTTCGAACGAACTGGGAGCCGGCCACCCGGACCAGGCGATTCGCGCGATGAGAGTGACTCTCACTCTCTCAGTTCTGCTTGGTTTGTGCTTTGTTTTGGCACTTGTATTTGGTCATAATATATGGATTCAAATGTTCAGTAGCAGTTCTAAAATAAAGGAGGAGTTTGCTTCAATAACACCCTTACTAGCAATATCTATATTACTAGATGCTGTCCAAGGTGTCTTATCAGGGGTGATTAGAGGATGTGGTAGGCAGCACTTGGCTGCATATGTAAACCTTGTAACTTTTTATCTCATTGGTTTACCAATATCATGTCTCCTTGGATTTAAGACCAATTTGCAATTCAAGGGTTTATGGATAGGGTTGATTTGTGGGCTTGTTTGTCAAACTGGAGCACTATTATTTTTCACATGGCGTGCCAATTGGTCCAAACTCCATCTCTCTCTGGACAAAATTAGACACAATGATCAACCAATTGTTGTTTAA 1494 0.3983 MLGSNNKSSHGTAATTTPLLLGDREEVEDAQQQEQHEEWWKRILDMDEAKHQLLFSLPMIVTNLLYYLITLVSVMLVGHLGDLQLAGSTLANSWFSVTGVSLMVGLSGALETLCGQGFGAKEYQMLGIYLQSSCIISFVFSIIISIIWFYTQHILVLLHQSQDISKTAALYMKFFFPGLFAYGFLQNILRFLQTQSVVTPLVILSAIPLLIHIGIAYTLVEKTGLGFVGAPISASISLWIAIVLLALYVMYGKNFKLTWEGFSTQSFHYVFPSLKLALPSAAMVCLEYWAFEVLVFLAGIMPDSEITTSLIAICANTEFIAYMITYGLSAAASTRVSNELGAGHPDQAIRAMRVTLTLSVLLGLCFVLALVFGHNIWIQMFSSSSKIKEEFASITPLLAISILLDAVQGVLSGVIRGCGRQHLAAYVNLVTFYLIGLPISCLLGFKTNLQFKGLWIGLICGLVCQTGALLFFTWRANWSKLHLSLDKIRHNDQPIVV* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1373 497 PANTHER PROTEIN DETOXIFICATION 27 488 - -
Ahy18g1373 497 MobiDBLite consensus disorder prediction 1 32 - -
Ahy18g1373 497 MobiDBLite consensus disorder prediction 1 16 - -
Ahy18g1373 497 CDD MATE_eukaryotic 48 480 IPR045069 GO:0042910|GO:1990961
Ahy18g1373 497 TIGRFAM matE: MATE efflux family protein 58 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy18g1373 497 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 488 - -
Ahy18g1373 497 Pfam MatE 279 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy18g1373 497 Pfam MatE 58 218 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1373 Ahy-Chr18 25641584 25646145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1373 K03327 - gmx:100816310 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1373 18 25641584 25646145 Ahy18g1373 18 25641584 25646145 ECH
Ahy18g1373 18 25641584 25646145 Ahy8g1994 8 39831665 39835456 hybridization