Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1325 ATGAGGGGTCCTTTGGGTGCAGTCATAGGAAGATACTCATCAAGTGATGGAACCACCCCAGTTGGTGGGATCATAAGGCACAACAGAAAATGCAGCGACATTGCTGTTCTTGTTATCTTCATAGCATTCTGGATTTCCATGATTGTAAACTCTAGCTTTGGTTTCAACCAAGGCAACCCTTTGAGGCTTACTTATGGGCTGGATTACAAAGGAAATGTGTGTGGGGACAAGCATGCAGGGCTTCATGAAGTTGAGCTATTGTACTGGCTAAATCCTAATCAGGTATATCAAAGTGGATTGAAGGATAGCAAGCTAAAACTGGTCGACGCTCGCAGCATATGCTTGTTGGACTGCCCTGTACCTTCTGAAGATTCACTTAATTGGGTGTGTGATTATCCCGAAGGAGACATTCGTCTTAGTATGGATGATTGGATTGATAGCAACTATAATTATTATGAGTACCTTACACCGGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCCTGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGACTTGCCAATTCATTGCTCGTGCATCAAATGTGTCATTAAACCATTGGCAGCAGATGGGTGGAGTTAGCATCAATGAAGACATTGTTATTGATAAGTCTATTCACAAGTATATCAACTCTCGGTCAGCCGTCTTAAAGAGATACATGGCTGACATAGGAAAGTCATGGCCTGTGCTGATTGTTTGTGGGGGGATTATACCTCTTTTTCTATCCGTGATTTGGCTGCTGATGATTCGGTATTTTGTCACTGCAATGCCTTGGGTGACAGTGGTTTTCTTTAATCTCCTAATGGTATCAGTCACAATGTTCTACTACCTGAAAGTTGGATGGATAGGAAATAATGCTATTTCCCCCATCATTGGCGAGCATGATCCTTACATTCATGTATCTGGGAGGGAGCTGACTCATCTACGCATTGGCACTATAATGATGACATTTATAACAATTGTTGCAATTCTGACATCAATTGCTATTGTCCGACGCATCCTTATGGGAACTTCTGTCCTTAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCGAGCGCTCATCACTTTTCCAGTCATACCGTATTGTATTCTTGCAGTGTTCTACATGTTCTGGATTTCTGCTGCTCTCCATTTGTTCAGCTCTGGTCAGGTTGTTCAAAACAACTGTAATTCTAATTGCTGCGCATATGATCTCCTTGAGAAAAAGGTGAACTGTGATCGTTGTTGCGGATATAGCATTCGTTACACACCACATATTGGAATCGCCATCCTTTTTCATCTATTTGGGTGTTACTGGGCCACACAATTCTTCATAGCATGCTCATCAACAGTGATTGCTGGATCTGTTGCCTCTTATTATTGGGCACGTGGTGAAAATTCTCAAGAAATCCCTCTTCTTTCAGTCATTTCCTCCATGAAGAGGCTTATGCGTTACAATCTGGGTTCTGTGGCTCTTGGCTCTCTGACTGTATCATTTGTAGAGTCGATCCGCCTTTTGCTTGAATCCATGCGTCGCAAACTAAAAGTCTCCAGTTATGAGCCTGACAACTGGATTGGCAAGGCTGCATACCGATCTTCTCAATTTTTTCTAAGGTGTATTGGATGGATCATCAAATCAGTGAATCGAAATGCATACATAATCATTGCTATAACAGGTGAAAGTTTCTTCAGATCTTCTGCTATTGCAACAGAATTGATTATGAATAACATCCTGCGGATCGGACGTGTCAATGTGATTGGAGATGTTATTTTGTTCCTTGGAAAACTATGTGTTAGTCTCTCAAGTGCTGTTTTTGCATTCCTCATGTTGGATACACACAAGTATAGAGCTGCACATAACAAGATCACATCCCCACTCTTGCCTGTTCTGGTTTGCTGGGTTCTTGGGTACATTGTTGCAACGCTTTTCTTTGGAGTTGTCGAGATGTCAATTGATACCATCATTCTCTCATACTGCCAGGATTCAGAAGAGAATGGAACAGCACAGTATGCTCCACCCCTTCTCATGGAAACTCTCAACAATGACCAAAATGAGACGCAAAGGCTTACACAAGGATCCCAATGA 2097 0.4201 MRGPLGAVIGRYSSSDGTTPVGGIIRHNRKCSDIAVLVIFIAFWISMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHAGLHEVELLYWLNPNQVYQSGLKDSKLKLVDARSICLLDCPVPSEDSLNWVCDYPEGDIRLSMDDWIDSNYNYYEYLTPEMRNSSLQLQGPCYPVIFPSVNVYWTCQFIARASNVSLNHWQQMGGVSINEDIVIDKSIHKYINSRSAVLKRYMADIGKSWPVLIVCGGIIPLFLSVIWLLMIRYFVTAMPWVTVVFFNLLMVSVTMFYYLKVGWIGNNAISPIIGEHDPYIHVSGRELTHLRIGTIMMTFITIVAILTSIAIVRRILMGTSVLKVAAKVIGEVRALITFPVIPYCILAVFYMFWISAALHLFSSGQVVQNNCNSNCCAYDLLEKKVNCDRCCGYSIRYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWARGENSQEIPLLSVISSMKRLMRYNLGSVALGSLTVSFVESIRLLLESMRRKLKVSSYEPDNWIGKAAYRSSQFFLRCIGWIIKSVNRNAYIIIAITGESFFRSSAIATELIMNNILRIGRVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHKYRAAHNKITSPLLPVLVCWVLGYIVATLFFGVVEMSIDTIILSYCQDSEENGTAQYAPPLLMETLNNDQNETQRLTQGSQ* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1325 698 Pfam Plasma-membrane choline transporter 324 667 IPR007603 GO:0022857|GO:0055085
Ahy18g1325 698 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 695 - -
Ahy18g1325 698 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 695 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1325 Ahy-Chr18 24284628 24289352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1325 K15377 - gmx:100789185 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1325 18 24284628 24289352 Ahy18g1325 18 24284628 24289352 ECH
Ahy18g1325 18 24284628 24289352 Ahy8g1966 8 39391280 39396057 hybridization