Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1321 ATGGCGAAGAAGAAGGAGAAGAAAGTGAACGTGTCTGGGAAGCCGAAACACTCCCTGGACGTGAACCGCAACAATGGCGCCGCCACCAAGGAAAACACCCGCTCCGCCTCCACCGTCCGCCGCCTCAAGATGTACAACACGAGGCCCGTCCGAGACCGCAAGGGCAAGATCCTCAGCCACGATCTCCAGTCCAAGGACCTGCCTGCTACTCGCATCCAGCCTGACCGCCGCTGGTTCGGGAACACTCGCGTGGTGAATCAGAAAGAGCTTGAGGTCTTCAGGGAAGAGCTGCAAAGCCGAATGTCAAGTAACTACAATGTTATTCTGAGGGAGAAGAAGCTTCCCTTGTCGCTCCTCAGCGATCACCAGAAGCAAGCAAAGGTTCACCTTCTTGATAGAGAGCCTTTCGCGAATGCATTTGGGCCAAAGACTACGAGAAAGCGCCCAACCCTCTTGGCTGCTGATTACGAGTCCTTGGTTAAGAAAGCTGATGGTTCTCAAGAGGCTTTTGAACAGAAGTTTGGTGCTAGTGGATCTTCAGATGCTAATGAAGAAGATGGATTTAGGGACTTAGTGCGGCATAATATGTTTGAAAAAGGTCAAAGTAAACGTATTTGGGGTGAACTCTACAAGGTCATTGATTCTTCTGATGTTGTTGTCCAGGTTCTAGATGCTAGGGATCCACAAGGCACAAGATGTTACCATTTAGAGAGGCATTTGAAGGAACATTGCAAGCACAAACATATGGTTCTTTTATTGAACAAGTGTGATCTACTTCCTGCTTGGGCTACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATATCCAACTCTAGCATTTCATGCAAGCATTAATAAGTCCTTTGGAAAGGGTTCACTTCTATCAGTTCTAAGACAATTCTCTCGATTGAAAAGTGACAAGCAAGCTATATCTGTTGGATTTGTTGGATATCCAAATGTTGGAAAATCTTCAGTGATCAATACATTGCGTACAAAAAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTCTGGCAGTATATAACACTTACAAAGAGGATCTTTTTGATTGATTGTCCAGGAGTTGTTTACCAAAACAAGGACTCTGAAACAGATGTTGTCCTTAAGGGCGTGGTACGTGTTACAAACTTGCAAGATGCTGCAGACCATATAGGTGAGGTCTTGAAACGTGTGAAGAAGGAGCACCTGAAAAGAGCGTATAGAATAAATGAGTGGGTGGATGAAAATGACTTCCTACTTCAGCTTTGTAAATCAACGGGAAAACTTCTTAAGGGTGGGGAGCCTGACCTGATGACCGCAGCAAAGATGATTCTTCATGATTGGCAGAGGGGCAAGATACCATTTTTTGTTCCTCCTCCACAACTAGATGACTTACCTGAGGAAACCAATGTCAATGGTGTAGACATAGATGAAGCAGTTGATTCCAACCAGGCATCTGCAGCTATGAAAGCTATTGCAAATGTTCTATCATCCCAACAACAAAGAAATGTGCCTGTTCAAAAGGACTTATATGACGAGACTGAGTTGCAAGGAGAAACAGCCGACCAACTTCAAAATATGGAGGATGATTCAGACGAAGAGAACTCAACGTCTGACAGTGACACATCTGAGCAGGATCCAGCTACTGATGCCCCACCTGAGAAGCTTCCTTCTGCATAG 1686 0.4514 MAKKKEKKVNVSGKPKHSLDVNRNNGAATKENTRSASTVRRLKMYNTRPVRDRKGKILSHDLQSKDLPATRIQPDRRWFGNTRVVNQKELEVFREELQSRMSSNYNVILREKKLPLSLLSDHQKQAKVHLLDREPFANAFGPKTTRKRPTLLAADYESLVKKADGSQEAFEQKFGASGSSDANEEDGFRDLVRHNMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERHLKEHCKHKHMVLLLNKCDLLPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFSRLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNKDSETDVVLKGVVRVTNLQDAADHIGEVLKRVKKEHLKRAYRINEWVDENDFLLQLCKSTGKLLKGGEPDLMTAAKMILHDWQRGKIPFFVPPPQLDDLPEETNVNGVDIDEAVDSNQASAAMKAIANVLSSQQQRNVPVQKDLYDETELQGETADQLQNMEDDSDEENSTSDSDTSEQDPATDAPPEKLPSA* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1321 561 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 206 367 IPR030378 GO:0005525
Ahy18g1321 561 MobiDBLite consensus disorder prediction 1 37 - -
Ahy18g1321 561 CDD NGP_1 208 364 - -
Ahy18g1321 561 Pfam 50S ribosome-binding GTPase 312 400 IPR006073 GO:0005525
Ahy18g1321 561 MobiDBLite consensus disorder prediction 527 542 - -
Ahy18g1321 561 PRINTS GTP1/OBG GTP-binding protein family signature 312 332 IPR006073 GO:0005525
Ahy18g1321 561 PRINTS GTP1/OBG GTP-binding protein family signature 358 373 IPR006073 GO:0005525
Ahy18g1321 561 MobiDBLite consensus disorder prediction 17 37 - -
Ahy18g1321 561 MobiDBLite consensus disorder prediction 511 561 - -
Ahy18g1321 561 Pfam NGP1NT (NUC091) domain 44 168 IPR012971 -
Ahy18g1321 561 Gene3D - 367 459 IPR023179 -
Ahy18g1321 561 Gene3D - 196 366 IPR027417 -
Ahy18g1321 561 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 2 548 IPR024929 GO:0005730
Ahy18g1321 561 PANTHER GTP-BINDING PROTEIN-RELATED 2 548 - -
Ahy18g1321 561 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 435 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1321 Ahy-Chr18 24251632 24255832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1321 K14537 - gmx:100788649 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1321 18 24251632 24255832 Ahy18g1321 18 24251632 24255832 ECH
Ahy18g1321 18 24251632 24255832 Ahy8g1963 8 39354289 39358467 hybridization