Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1308 ATGGCAGTGAGCTTTCTGCAGGAACGCGAGGTATCCGACCTCTGCCTTGGGAAACCACCGTTGAGGTCCCTCTCTGCTTCCTCCACCATCGCACACGCCTTGGCTGCTCTCAACAACTCGGAAGACAACTTCATCAGTGTCTGGACCTGTGATCATCGCAGCAAGAAGGAAGAAGAAGGAGAAGAAGAAGGAGGAGAGTGCTGTAGATGCGTTGGCAAAGTGTGCATGGTTGATGTTGTTTGCTTCCTTTCCAGGGAAGACAACCTCTTGTCTCCCTCTCAAGCTCTCAAAGCTCCTCTTTCTGTTATTCTCACTCAAGCTCCGCCTCGGATCGTCGTGCATCTAGAACCTTCTTCCACTTTACTGGAAGCAATTGATCTGATTCTCCAAGGAGCACAGAATCTTGTGGTGCCGATTATAGCAGCAACAAGAAAGAGTGGAATCTCAAGAAGAAAACAGATTCAGATTCAGAAATCATTGTCAACAAGCCACAATGGGCGTGAATTCTGCTGGATAACGCAAGAAGATGTGATTAGATTCCTACTTGGCTCCATTGGCCTCTTCACCCCTCTCCCTGCACTCTCTATTGACTCCCTCGGCATCATTTCCACCGATGTTCTTGCCATTGACTACTACTCCCCTGCATCCTTGGCGTTACCGGCGATTTCCAAGTCTCTGGCGGATCAAACTTCTGTTGCCATTGTTGATAGTGATGGCACCTTCATTGGCGAGATTTCGCCCTCTACTCTTGGTTGTTGTGACGAGACGGTTGCGGCCGCCATCGCCACTCTCTCTGCCGGGGACCTGATGGCCTACATTGATGGCGGTGGGCCCCCGGAGGATCTTCTCAGAGTGGTGAAGGCGAGGTTGAGAGAGAAGAATTTGGAGAAAATGCTTCAAGAGTTCATGATTTTGTCGCCTTTAGCTAGCGACGCTTCGTCGGCCTCGTCTGCATCATCGTCTGACGAGGAGTCCTCGTCGGCCAGAATACGGATGAGGCCCGGCGGAAGGTACTCTAGATCTTCGAGCTACTCGGCGAGGATGGTGAGGAAGGCTGAGGCCATAGTGTGCCATCCAAAGAGCTCACTTATTGCTGTGATGATTCAAGCAATTGCTCATAGAGTGAACTATTTGTGGGTTATTGAAGATGATTGCAGCTTAGTTGGCATTGTAACATTCTCAAATATGTTGAAAGTTTTCAGAGAACATTTAGAGACTATGTAA 1224 0.4935 MAVSFLQEREVSDLCLGKPPLRSLSASSTIAHALAALNNSEDNFISVWTCDHRSKKEEEGEEEGGECCRCVGKVCMVDVVCFLSREDNLLSPSQALKAPLSVILTQAPPRIVVHLEPSSTLLEAIDLILQGAQNLVVPIIAATRKSGISRRKQIQIQKSLSTSHNGREFCWITQEDVIRFLLGSIGLFTPLPALSIDSLGIISTDVLAIDYYSPASLALPAISKSLADQTSVAIVDSDGTFIGEISPSTLGCCDETVAAAIATLSAGDLMAYIDGGGPPEDLLRVVKARLREKNLEKMLQEFMILSPLASDASSASSASSSDEESSSARIRMRPGGRYSRSSSYSARMVRKAEAIVCHPKSSLIAVMIQAIAHRVNYLWVIEDDCSLVGIVTFSNMLKVFREHLETM* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1308 407 ProSiteProfiles CBS domain profile. 348 406 IPR000644 -
Ahy18g1308 407 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN-RELATED 6 407 - -
Ahy18g1308 407 Gene3D - 328 402 IPR046342 -
Ahy18g1308 407 Pfam CBS domain 353 399 IPR000644 -
Ahy18g1308 407 SUPERFAMILY CBS-domain pair 191 405 IPR046342 -
Ahy18g1308 407 MobiDBLite consensus disorder prediction 312 340 - -
Ahy18g1308 407 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 6 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1308 Ahy-Chr18 23853503 23855272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1308 - - adu:107462620 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1308 18 23853503 23855272 Ahy18g1308 18 23853503 23855272 ECH
Ahy18g1308 18 23853503 23855272 Ahy8g1958 8 39281710 39283531 hybridization