Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1268 ATGGCTTCGGTTCACAGCGCCATCCCAACCCGCAGTTTCCTCTCACCGGTTTCCAAATCGAAATCGAAATCATTGGCCGCCACCAAGCTGCAGAGCTTCCCGGCGTCGAGATTCTCCGGGAATCCAATTTTCTCGGGAAACGAAAGGAGGATTTTGGCGGCGGTGAATTCGTCGGTGGAGGAAGTAGACGTGATATCGGTGCAGAGCGGCGACATTACGGACCAGCAGGAGGGCGGAGCAGCTGCGGCGAGCAGGGCGGAGGTGGAAGGCGGAGGCAGCGACGGCGAGTTGGCGACTCAGGTGAGTGGATTCGGAACGGGGGAGGGTTTGTTATCGTTGGAAGGGTTTTCTTCTGCTTCGACTTCTTCTTCAATTGGGAATGAGACTGAAGAGAGCATGGAGAAGCTTATGGATAGAACCATCAATGCAACTATTGTTCTCGCCGCCGGAACCTTCGCTATCACCAAGCTCCTCACCATTGATCATGATTACTGGCATGGATGGACGCTTTTTGAGATACTACGGTATGCACCTCAGCATAATTGGTCTGCTTATGAGGAAGTTCTTAAGACGAATCCAGTTTTTGCAAAGATGGTGATCAGTGGTGTTGTTTATTCCATTGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTATTTTTGAGTTTGACCGAGCTAGGATGTTCAGATCAGGGCTTGTTGGGTTTACTCTGCATGGCTCTCTTTCTCATTACTATTATCAGTTTTGTGAGGAGCTATTTCCTTACAAAGAATGGTGGGTGGTTCCTGCCAAAGTTGCATTTGATCAAACAGCGTGGTCTGCAGTTTGGAACAGCATTTATTATACCGTAGTTGCATTATTGCGTCTTGACTCTCCTATCAGCATTTTTAACGAATTGAAGGCAACCTTTTTCCCCATGCTGACTGCTGGGTGGAAGCTGTGGCCATTTGCTCATCTCATCACTTATGGTGTAATTCCAGTTGAGCAAAGACTTCTTTGGGTGGATTGTGTAGAGCTCATTTGGGTGACCATACTTTCAACTTATTCAAATGAAAAATCAGAAGCAAGGAACTCAGAGTCCGAGGTACCTGCAGAAGTGAAATCAATCGAGGACTAA 1119 0.4781 MASVHSAIPTRSFLSPVSKSKSKSLAATKLQSFPASRFSGNPIFSGNERRILAAVNSSVEEVDVISVQSGDITDQQEGGAAAASRAEVEGGGSDGELATQVSGFGTGEGLLSLEGFSSASTSSSIGNETEESMEKLMDRTINATIVLAAGTFAITKLLTIDHDYWHGWTLFEILRYAPQHNWSAYEEVLKTNPVFAKMVISGVVYSIGDWIAQCFEGKPIFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEELFPYKEWWVVPAKVAFDQTAWSAVWNSIYYTVVALLRLDSPISIFNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARNSESEVPAEVKSIED* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1268 372 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 114 369 - -
Ahy18g1268 372 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 114 369 IPR007248 GO:0016021
Ahy18g1268 372 Pfam Mpv17 / PMP22 family 294 347 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1268 Ahy-Chr18 22512787 22516278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1268 185 355 Miscellaneous Gene Families AT2G14860 27.485 1.39e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1268 K13348 - gmx:100805057 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1268 18 22512787 22516278 Ahy18g1268 18 22512787 22516278 ECH
Ahy18g1268 18 22512787 22516278 Ahy8g1934 8 38717702 38721002 hybridization