Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1265 ATGGCAAACTTCCTCGCTCAGTTCCAATCCATCAAGAGTACCTCCGATCGCCTCGTCATTTCAGTCGAGGATGTGAGTGACTTGTGGCCGGCTGTCAAGCCTGCTTTTGAAGCACGGTTGCCGTTCAAGCAGGGGTCTTTGAATAACAAGACACGGAACCCTGTCTTAGTCGAGAAGTTGCCAGCTGAGTTCATATTAACTACAGATTCAAGGCTACGGAGCCGCTTCCCTCAGGAGCAGCTGTTATTTTGGTTTCGAGAGCCGTATGCAACTATTGTACTTGTTACCTGTGAGGATCTTGATGAGTTCAAAACCATCCTCAAACCACGTCTGAAATTAATTGTCCAAAATGATGAGAGAGAATGGTTTATTGTATTTGTATCTAGAGCTCATCCAGCAAATGATAAGGCAAGTGCAATGGCAAAAAAAGTATATGCCAAACTTGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAGTATGATATACATTCGCCTGAATCAAATTTTTGGGAAGATCTAGAATCAAAGATAATGGAGTGCATCAGAAATACACTGGATAAGCGTGTACAATTTTATGAGGAAGAGATAAGAAAGCTCAGCGAACAGCGGCTCATGCCAGTCTGGAACTTCTGTAATTTTTTCATTTTGAAGGAAAGCTTGGCGTTTATGTTTGAAATGGCACACCTCCATGATGATGCCTTACGGGAGTATGATGAACTTGAACTCTGCTATATTGAAACAGTTAACAACACTGGAAAGCAAAGAGACTTTGGAGGGGCAGACCATGGTGACGATCAAGCAGCATTGCTTAATCCAGGAAACAAAGCTTTGACGCAGATTGTTCAAGATGACTCATTCAGGGAGTTTGAATTTCGACAGTATCTATTTGCCTGTCAATCAAAGCTCTTACTCAAGCTAAATCGTCTATTTGAGGTTGCATCAAGAGGTTATTCGTTCATAATAAGCTTCTCAAAATCTTTGGCACTGCATGAGCGTATTCTGCCCTTTTGCATGCGTGAAACCTGGGTGGTAACTGCTTGCTTGGCTTTAATTGACGCAATACTTTCTAATTATAATGATGGACTCATGGCACCTGACATAGAGAAAAGGTTCTTTCATCTTCTAGGTGACCTATATTCGCTAGCAAGAGTGAAGTTCATGAGGCTTGCCTATTTAATTGGATATGGAACTGAAATTGAAAGAAGTCCTGTCAACAGTGCTGCTCTCAGCTTGCTATCTTGGCCTAAGCCAGCAGTTTGGCCTTCAGTTCCTGCAGATGCCTCAGCAGAGGTGCTTGAGAAAGAAAAGGTGATTCTTCAAACTACGTCTAGAACCAAGCCTTTTGGTATCCAGAGGAAGCCCCTGCCTCTTGAACCTACTGTGCTGCTGCGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGCATTTGAAACATTTGATGGTCGCCAGGGTATAACCGAAGGGATGTCGCCATCACAGAAAGTACCTCCAAGTTCCATACCGCGCACTAATTCTTCACCTGGAAACTTTGATGGCTCAATTGACCGGCCTATGAGGCTTGCTGAGATTTTTGTTGCTGCTGAGCATGCTTTGAAGAAAACAATTTCCAGCCAAGAACTGTTGAAATCATTATCATCATCTGAGGAATTTGAGCAAAAATATTTGGAGCTAACTAAAGGTGCTGCTGACAATTATCATCGTTCCTTGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATAGCAGCTGTCTCCTTTAAGCATGGGCATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTTTATTCCGGTGAAGGATGGCAGGACTTGTTGGCTGAGGTCCTCCCTAATTTAGCCGAGTGTCAGAAGATACTCAATGATCAAGCTGGTTACTTACTATCTTGTGTGAGGTTACTCTCTCTTGATGAAGGATTGTTTTTGAACGAAGAGCGTCAAGCTTTCCAGTCAGAACTTGTTCGTCTTGCCCACAGTGAATTGAAAGACCCTGTACCTCTAGATGTATCATCATTAATAACATTTTCTGGAAATCCTGGACCACCATTGGAGTTATGTGATAGGGATCCTGGTACCCTTTCTGTTACTGTTTGGAGTGGTTTTCCAGATGATATAACTCTTGATTCAATTAATCTTACGATAGTGCCAACATCTAGTGCTGATGAAGGTGCAAAGGCATTGCAGAGTTCTACACCTAATGTCTTACATCCTGGTCGGAATACTATTACCTTGGATCTGCCACCCCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCAAAAATAGGTCCTGCAGATACTGATGATTTCATGAGTTACGAAAAGCCGGCTAAACCTATTTTGAAGGTGTTAAGGCCTAGAGCTCTGGTTGATCTTGATGCTGCTGTTTCCTCACCTTTGTTAACAAATGAACGTCAGTGGATTGGTATTTTAGTTCGACCGATAAATTATTCCCTCAAAGGTGCTGTCTTGTATATTGATACTGGCCCAGGGTTGGAGATTGATGACTCGCATGTCATTGAGATGGAAACCTATGCTGATGTATCAGAAAATGATGACAACAAGGTGCAGAAAGACGGTGCTCAGATAGACTCTTTAAATTATGAGAAGAAGGTTGAACGCTTGACTCTTCATAATGGAAAAATTGAGTTTCCAAATTGGGCAAGTGACACTCCTTCTATTATCTGGGTTCTGGTTCGAGCCATGAGTGACATGCTCAGCAGAGGATCATCATCAGTTACAACTAGGAGAGAGAGCATTGTAGATGCCATGAGAACAATTGCTCTGAACCTTGAATTTGGAGTATACCACAATCAGATATTCGAAAGGACCCTGGCAGTTCATTTTACATATCCTTTCTATGTGACGACACGTGTAACCGATAAATGCAATGATGGTACATTGCTTTTGCAGGTTATACTTCACTCTGAAGTAAAGGCTACACTGACCATATATGATGCTTGGCTTGATCTTCAACATGGATTTATTCATAATGGTCAAACTGAGGGTAGACCTAGTTCAAGCCTCTTCCCACTAGTCATATCTCCTACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTTGGCAAGACAAATGGAGAAGAAGACAGAAAGCAGCAAGAAAGCATATTAAATATCAAATATGGAATTTCTGGTGATAGAACAATTGGAGCCCACCCTCCTGTCATGGATGAATCTACTAAAGTTGATGATGCCAGACAGGAGTTGATCTTCAAGAATGCAATTACTTTGCAAAGGCCTGTGCTTGATCCATGCTTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGTCTAAGAGTTGGGCAACTAGTTAAGATGCAATGGAGGGTGGAAAGGTTAAAGGATTTGGATGAGAAAGAAGTTCCTGAACAGAATGATGAGGTTCTATACGAGGTAAAAGCGAATTCTGGAAATTGGATGATAGCTGGGAGGAAACGAGGGCATGTGTCGCTCTCCCCAAAACAAGGTGCAAGGATAATTATCTCAGTATTATGCATGCCACTGGTGGCTGGCTATGTTCGCCCGCCTCACCTTGGGCTACCAGACGTTGATGAAGCAGATGTAAGCTGCAAACCTGCTGGGCCGCATCTGGTTTGCGTTTTGCCCCCAGCTCTGAGCTCATCCTTCTGCATTCCAGTCAATTCATGA 3753 0.4269 MANFLAQFQSIKSTSDRLVISVEDVSDLWPAVKPAFEARLPFKQGSLNNKTRNPVLVEKLPAEFILTTDSRLRSRFPQEQLLFWFREPYATIVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSRAHPANDKASAMAKKVYAKLEVEFNTKKRERCCKYDIHSPESNFWEDLESKIMECIRNTLDKRVQFYEEEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYIETVNNTGKQRDFGGADHGDDQAALLNPGNKALTQIVQDDSFREFEFRQYLFACQSKLLLKLNRLFEVASRGYSFIISFSKSLALHERILPFCMRETWVVTACLALIDAILSNYNDGLMAPDIEKRFFHLLGDLYSLARVKFMRLAYLIGYGTEIERSPVNSAALSLLSWPKPAVWPSVPADASAEVLEKEKVILQTTSRTKPFGIQRKPLPLEPTVLLREANRRRASLSAGNAFETFDGRQGITEGMSPSQKVPPSSIPRTNSSPGNFDGSIDRPMRLAEIFVAAEHALKKTISSQELLKSLSSSEEFEQKYLELTKGAADNYHRSLWKRHGVVLDGEIAAVSFKHGHFDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRLLSLDEGLFLNEERQAFQSELVRLAHSELKDPVPLDVSSLITFSGNPGPPLELCDRDPGTLSVTVWSGFPDDITLDSINLTIVPTSSADEGAKALQSSTPNVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKIGPADTDDFMSYEKPAKPILKVLRPRALVDLDAAVSSPLLTNERQWIGILVRPINYSLKGAVLYIDTGPGLEIDDSHVIEMETYADVSENDDNKVQKDGAQIDSLNYEKKVERLTLHNGKIEFPNWASDTPSIIWVLVRAMSDMLSRGSSSVTTRRESIVDAMRTIALNLEFGVYHNQIFERTLAVHFTYPFYVTTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQHGFIHNGQTEGRPSSSLFPLVISPTSKAGILFSICLGKTNGEEDRKQQESILNIKYGISGDRTIGAHPPVMDESTKVDDARQELIFKNAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDLDEKEVPEQNDEVLYEVKANSGNWMIAGRKRGHVSLSPKQGARIIISVLCMPLVAGYVRPPHLGLPDVDEADVSCKPAGPHLVCVLPPALSSSFCIPVNS* 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1265 1250 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1132 1218 IPR022233 -
Ahy18g1265 1250 PANTHER BNAC09G30770D PROTEIN 1 1248 - -
Ahy18g1265 1250 MobiDBLite consensus disorder prediction 491 517 - -
Ahy18g1265 1250 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 1 1248 IPR045126 GO:0048193|GO:1990071
Ahy18g1265 1250 Coils Coil 185 205 - -
Ahy18g1265 1250 MobiDBLite consensus disorder prediction 487 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1265 Ahy-Chr18 22455540 22466734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1265 K20307 - gmx:100787264 2175.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1265 18 22455540 22466734 Ahy18g1265 18 22455540 22466734 ECH
Ahy18g1265 18 22455540 22466734 Ahy8g1932 8 38690811 38702466 hybridization