Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1235 ATGGCAATCGCCGGCGGCGCCCACACGCCGCGCTCCGAAGCTAACCTCTTCAGGTTCTGCCCCTTCTGGAGCTCCGGCAACGCTTCTTCTTCTTCTTCTTCTCTATCTTCTTCAGCTCACAACAACCATAACCACCGCTCCGAAGGGAACAACACTGCTACTTCTGCTTCTGCGTCTTCTTCTTCTTCTTCTTCTGCCAAAACAGTGTCGGCGGTGGCGAGGTCGCTGTTCCCTCCACGTCGAAGGCTCCGTCTCGATCCTTCAAGCTGCCTCTACTTTCCATATGAACCGGGGAAACAGGTTAGGAGTGCGGTTCGTTTGAAAAACACAAGCAAGTCGTATGTTGCTTTCAAGTTTCAAACTACGGCACCAAAGAGTTGTTACATGAGGCCTCCTGGTGGTATTATTGCTCCTGGTGAAAGCTTGATTGCAACCGTGTTTAAGTTTGTGGAGCAACCTGAGAACAATGAAAAGATGTCAGATCAGAAGAACAAGGTGAAGTTCAAAATCATGAGTCTCAAAGTGAAAGAAGGAGTGGACTACGTACCTGAGCTGTTTGACGAACAAAAGGATCTAGTCTCAGTGGAACGAATCTTGAAGGTTGTATTTATTGATCCAGAAAGGCCTAGTCCTGCTTTGGAAAAACTGAAGAGACAGCTTAATGAAGCTGATGCTGCAGTTGAGGCTCGAAAGAAGCCACCTCCTGTGGAGGTGGGTCCTCGTGTTGTAGCTGAAGGACTTGTAATTGATGAATGGAAAGAAAGAAGGGAGAGGTACTTGGCCAGGCAACAAGTTCAAGCAGTAGATTCAGTGTGA 816 0.4804 MAIAGGAHTPRSEANLFRFCPFWSSGNASSSSSSLSSSAHNNHNHRSEGNNTATSASASSSSSSSAKTVSAVARSLFPPRRRLRLDPSSCLYFPYEPGKQVRSAVRLKNTSKSYVAFKFQTTAPKSCYMRPPGGIIAPGESLIATVFKFVEQPENNEKMSDQKNKVKFKIMSLKVKEGVDYVPELFDEQKDLVSVERILKVVFIDPERPSPALEKLKRQLNEADAAVEARKKPPPVEVGPRVVAEGLVIDEWKERRERYLARQQVQAVDSV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1235 271 PANTHER VESICLE-ASSOCIATED PROTEIN 4-1 44 270 - -
Ahy18g1235 271 MobiDBLite consensus disorder prediction 26 64 - -
Ahy18g1235 271 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 44 270 IPR016763 GO:0005789
Ahy18g1235 271 Pfam MSP (Major sperm protein) domain 83 191 IPR000535 -
Ahy18g1235 271 SUPERFAMILY PapD-like 72 214 IPR008962 -
Ahy18g1235 271 Gene3D Immunoglobulins 79 208 IPR013783 -
Ahy18g1235 271 ProSiteProfiles Major sperm protein (MSP) domain profile. 82 204 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1235 Ahy-Chr18 21196779 21199228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1235 - - gmx:100778320 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1235 18 21196779 21199228 Ahy18g1235 18 21196779 21199228 ECH
Ahy18g1235 18 21196779 21199228 Ahy8g1906 8 38252750 38255208 hybridization