Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1184 ATGGAACGGTTCACCTTGCTTCTGTTATGCTTCTCATTGCTGCATCATACAGCTATTTCTACAATCATAGACACTATTAGTACTACACAGTACCTCACTGATGGTGACACCATGCTTTCAGCTGATGCAAACTTTGCACTTGGATTCTTCGGTATACCAGAAAGTTCCATGAACCGTTACCTTGGAATATGGTACTATAAAGTGCCAACTAGGACAGTGGCATGGGTTGCCAACAGAAACACTCCACTTAATGACTCATTTGGAATCTTGAAGATCACTGACAAAGGAATTCTTGCTCTTCATAGTCATAACAATGCCATCATTTGGCATTCCAACTCGTCAAGATTCGTTCAGCGACCGGTTGCAGTGCTTTTGGATTCAGGGAACCTCATTGTGAAGGAATATGGGAGCAACAACAATGACTTAAAAAGCTTTCTTTGGCAGAGTTTCGATTACCCTTTTGACACAATGCTGCCAGGGATGAAGTTCGGAAGCGACTTAAGTACAGGCTTGAATAGGTACTTAACATCTCAAATTAGCCCCGATGATCAATCTAAAGGTAACTATACTTTTCAGCTTGATATTGTTGGATATCCAGAATTATGTATAAGAAACGGTGAATCCAAGTCCTTTTCTAGTGGATCCTGGAATGGTCTTCGATTTGGTGGAATTCCCCGGTTAAAACAGAATACTATATACCACTACTACTTTGTTTACAGTAAGGAAGAGATATATTATACATTTGAGCTTCTTAATAGCTCAATGTATTCAAGATTTGTGCTATCTGCGAATGGAATCATGACACGTTATGTTTGGAGTTTGAGGAATCAAAGTTGGACACCCTACCTAACATTGCCAAATGATATCTGTGATAGTTATGGTAAATGTGGACCATATGGTAAATGTAATATAGACAACTCCCCTCCATGTGATTGCTTGAGCGGAACTGTACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTATAATGGTTGTATTAGAAGTAATCCGCTAAGTTGCCATGGAGATGGATTCAAAAAGTTTACTGGTCTGAAGCTGCCTGATACACAGAAAGCATCATGGTTAAATACTAGCATGAGTCTTGACGAGTACGCGAAGTTCTGCCTGAAAAATTGCTCCTGCATGGCTTATGCTGCATTGGATATCAGCAAAGGGGCAAGTGGGTGTTTAATGTGGCATGATGAGCTGATAGATATTAGAGTGCTGAGTGATCCACAACAAGATCTTTATGTTAGAATGTCCAAGAAAGATTCAGGTAGATGA 1287 0.4009 MERFTLLLLCFSLLHHTAISTIIDTISTTQYLTDGDTMLSADANFALGFFGIPESSMNRYLGIWYYKVPTRTVAWVANRNTPLNDSFGILKITDKGILALHSHNNAIIWHSNSSRFVQRPVAVLLDSGNLIVKEYGSNNNDLKSFLWQSFDYPFDTMLPGMKFGSDLSTGLNRYLTSQISPDDQSKGNYTFQLDIVGYPELCIRNGESKSFSSGSWNGLRFGGIPRLKQNTIYHYYFVYSKEEIYYTFELLNSSMYSRFVLSANGIMTRYVWSLRNQSWTPYLTLPNDICDSYGKCGPYGKCNIDNSPPCDCLSGTVPKVPEEWNQADWYNGCIRSNPLSCHGDGFKKFTGLKLPDTQKASWLNTSMSLDEYAKFCLKNCSCMAYAALDISKGASGCLMWHDELIDIRVLSDPQQDLYVRMSKKDSGR* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1184 428 Pfam D-mannose binding lectin 72 177 IPR001480 -
Ahy18g1184 428 Gene3D - 17 150 IPR036426 -
Ahy18g1184 428 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Ahy18g1184 428 SMART blect_4 29 153 IPR001480 -
Ahy18g1184 428 Pfam PAN-like domain 341 407 IPR003609 -
Ahy18g1184 428 SMART ntp_6 341 421 IPR003609 -
Ahy18g1184 428 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 218 IPR036426 -
Ahy18g1184 428 CDD B_lectin 29 153 IPR001480 -
Ahy18g1184 428 Gene3D Hepatocyte Growth Factor 339 421 - -
Ahy18g1184 428 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Ahy18g1184 428 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 10 422 - -
Ahy18g1184 428 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Ahy18g1184 428 CDD PAN_AP_plant 338 420 - -
Ahy18g1184 428 PIRSF SLG 1 428 IPR035446 -
Ahy18g1184 428 PANTHER - 10 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1184 Ahy-Chr18 19522625 19523933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1184 - - ahf:112769707 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1184 18 19522625 19523933 Ahy18g1184 18 19522625 19523933 ECH